Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH11P55287 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CDH11P55287 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CDH11P55287 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH11P55287 CYMP-203ENST00000474680 1263 ntBASIC14.51□□□□□ -0.09
CDH11P55287 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH11P55287 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH11P55287 RARRES2P8-201ENST00000566335 367 ntBASIC14.51□□□□□ -0.09
CDH11P55287 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH11P55287 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH11P55287 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH11P55287 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH11P55287 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH11P55287 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH11P55287 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH11P55287 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH11P55287 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CDH11P55287 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH11P55287 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDH11P55287 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH11P55287 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH11P55287 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH11P55287 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH11P55287 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CDH11P55287 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CDH11P55287 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH11P55287 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH11P55287 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDH11P55287 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDH11P55287 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDH11P55287 AC092127.1-201ENST00000567093 3455 ntBASIC14.5□□□□□ -0.09
CDH11P55287 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH11P55287 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH11P55287 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH11P55287 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH11P55287 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH11P55287 AC005237.2-201ENST00000434368 219 ntBASIC14.5□□□□□ -0.09
CDH11P55287 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH11P55287 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH11P55287 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH11P55287 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.5□□□□□ -0.09
CDH11P55287 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH11P55287 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDH11P55287 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH11P55287 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH11P55287 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH11P55287 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH11P55287 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH11P55287 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 AP001282.1-201ENST00000531301 1499 ntBASIC14.5□□□□□ -0.09
CDH11P55287 TCAF2P1-201ENST00000291129 2421 ntBASIC14.5□□□□□ -0.09
CDH11P55287 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH11P55287 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH11P55287 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CDH11P55287 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH11P55287 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH11P55287 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH11P55287 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
CDH11P55287 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH11P55287 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH11P55287 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms