Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 AC092850.2-201ENST00000623821 2697 ntBASIC14.06□□□□□ -0.16
CSNK1A1P48729 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CSNK1A1P48729 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 AC092127.1-201ENST00000567093 3455 ntBASIC14.05□□□□□ -0.16
CSNK1A1P48729 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CSNK1A1P48729 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CSNK1A1P48729 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSNK1A1P48729 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSNK1A1P48729 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSNK1A1P48729 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSNK1A1P48729 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 RPL37AP1-201ENST00000412502 279 ntBASIC14.05□□□□□ -0.16
CSNK1A1P48729 AC136604.1-201ENST00000418535 575 ntBASIC14.05□□□□□ -0.16
CSNK1A1P48729 HIST3H2BA-201ENST00000436555 524 ntBASIC14.05□□□□□ -0.16
CSNK1A1P48729 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 AL138828.2-201ENST00000615812 383 ntBASIC14.05□□□□□ -0.16
CSNK1A1P48729 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CSNK1A1P48729 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSNK1A1P48729 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CSNK1A1P48729 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CSNK1A1P48729 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSNK1A1P48729 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.05□□□□□ -0.16
CSNK1A1P48729 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 AC097359.3-201ENST00000603982 1210 ntBASIC14.04□□□□□ -0.16
CSNK1A1P48729 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 AL033527.5-202ENST00000641632 1098 ntBASIC14.04□□□□□ -0.16
CSNK1A1P48729 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CSNK1A1P48729 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK1A1P48729 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms