Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 BCL2-203ENST00000589955 5011 ntBASIC14.2□□□□□ -0.14
ATRXP46100 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.2□□□□□ -0.14
ATRXP46100 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATRXP46100 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC14.2□□□□□ -0.14
ATRXP46100 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.2□□□□□ -0.14
ATRXP46100 HIST2H2BB-201ENST00000449108 381 ntBASIC14.2□□□□□ -0.14
ATRXP46100 AC244197.1-201ENST00000456494 951 ntBASIC14.2□□□□□ -0.14
ATRXP46100 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATRXP46100 AP002803.1-201ENST00000528836 498 ntBASIC14.2□□□□□ -0.14
ATRXP46100 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.2□□□□□ -0.14
ATRXP46100 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC14.2□□□□□ -0.14
ATRXP46100 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.2□□□□□ -0.14
ATRXP46100 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ATRXP46100 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATRXP46100 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATRXP46100 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATRXP46100 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATRXP46100 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATRXP46100 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.19□□□□□ -0.14
ATRXP46100 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.19□□□□□ -0.14
ATRXP46100 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
ATRXP46100 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ATRXP46100 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC14.19□□□□□ -0.14
ATRXP46100 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC14.19□□□□□ -0.14
ATRXP46100 KRT18P25-201ENST00000508931 1278 ntBASIC14.19□□□□□ -0.14
ATRXP46100 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.19□□□□□ -0.14
ATRXP46100 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC14.19□□□□□ -0.14
ATRXP46100 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.19□□□□□ -0.14
ATRXP46100 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.19□□□□□ -0.14
ATRXP46100 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ATRXP46100 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
ATRXP46100 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.19□□□□□ -0.14
ATRXP46100 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 AC018892.3-201ENST00000623986 2499 ntBASIC14.19□□□□□ -0.14
ATRXP46100 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.19□□□□□ -0.14
ATRXP46100 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
ATRXP46100 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ATRXP46100 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
ATRXP46100 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
ATRXP46100 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.19□□□□□ -0.14
ATRXP46100 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.19□□□□□ -0.14
ATRXP46100 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.19□□□□□ -0.14
ATRXP46100 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.19□□□□□ -0.14
ATRXP46100 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
ATRXP46100 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ATRXP46100 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC14.19□□□□□ -0.14
ATRXP46100 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.19□□□□□ -0.14
ATRXP46100 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.19□□□□□ -0.14
ATRXP46100 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
ATRXP46100 RN7SL163P-201ENST00000583100 276 ntBASIC14.19□□□□□ -0.14
ATRXP46100 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.19□□□□□ -0.14
ATRXP46100 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATRXP46100 AC008764.6-201ENST00000595909 2069 ntBASIC14.19□□□□□ -0.14
ATRXP46100 AC254633.1-201ENST00000606790 345 ntBASIC14.19□□□□□ -0.14
ATRXP46100 AC018695.7-201ENST00000624587 2492 ntBASIC14.19□□□□□ -0.14
ATRXP46100 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ATRXP46100 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.18□□□□□ -0.14
ATRXP46100 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.18□□□□□ -0.14
ATRXP46100 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.18□□□□□ -0.14
ATRXP46100 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ATRXP46100 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC14.18□□□□□ -0.14
ATRXP46100 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.18□□□□□ -0.14
ATRXP46100 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.18□□□□□ -0.14
ATRXP46100 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.18□□□□□ -0.14
ATRXP46100 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
ATRXP46100 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.18□□□□□ -0.14
ATRXP46100 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.18□□□□□ -0.14
ATRXP46100 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
ATRXP46100 AC132938.4-201ENST00000623835 848 ntBASIC14.18□□□□□ -0.14
ATRXP46100 AC005052.1-201ENST00000625181 2492 ntBASIC14.18□□□□□ -0.14
ATRXP46100 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.18□□□□□ -0.14
ATRXP46100 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms