Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.98■□□□□ 0.15
HADHAP40939 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.98■□□□□ 0.15
HADHAP40939 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HADHAP40939 AC144831.1-201ENST00000573312 2656 ntBASIC15.98■□□□□ 0.15
HADHAP40939 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.98■□□□□ 0.15
HADHAP40939 AC099063.4-201ENST00000641099 1602 ntBASIC15.97■□□□□ 0.15
HADHAP40939 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.97■□□□□ 0.15
HADHAP40939 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HADHAP40939 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HADHAP40939 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HADHAP40939 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.97■□□□□ 0.15
HADHAP40939 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HADHAP40939 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HADHAP40939 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.97■□□□□ 0.15
HADHAP40939 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HADHAP40939 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.97■□□□□ 0.15
HADHAP40939 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HADHAP40939 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.97■□□□□ 0.15
HADHAP40939 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
HADHAP40939 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.97■□□□□ 0.15
HADHAP40939 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.97■□□□□ 0.15
HADHAP40939 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HADHAP40939 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
HADHAP40939 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HADHAP40939 AL139400.1-201ENST00000366220 510 ntBASIC15.97■□□□□ 0.15
HADHAP40939 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.97■□□□□ 0.15
HADHAP40939 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.97■□□□□ 0.15
HADHAP40939 SPDYE17-201ENST00000412399 783 ntBASIC15.97■□□□□ 0.15
HADHAP40939 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.97■□□□□ 0.15
HADHAP40939 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.97■□□□□ 0.15
HADHAP40939 METTL21AP1-201ENST00000438852 635 ntBASIC15.97■□□□□ 0.15
HADHAP40939 MTND6P24-201ENST00000440466 518 ntBASIC15.97■□□□□ 0.15
HADHAP40939 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.97■□□□□ 0.15
HADHAP40939 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HADHAP40939 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.97■□□□□ 0.15
HADHAP40939 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.97■□□□□ 0.15
HADHAP40939 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HADHAP40939 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.97■□□□□ 0.15
HADHAP40939 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HADHAP40939 AC015911.4-201ENST00000588022 1070 ntBASIC15.97■□□□□ 0.15
HADHAP40939 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.97■□□□□ 0.15
HADHAP40939 AL450472.2-201ENST00000603663 1156 ntBASIC15.97■□□□□ 0.15
HADHAP40939 AL133215.2-201ENST00000609242 977 ntBASIC15.97■□□□□ 0.15
HADHAP40939 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.97■□□□□ 0.15
HADHAP40939 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HADHAP40939 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HADHAP40939 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HADHAP40939 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HADHAP40939 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HADHAP40939 AC090616.6-203ENST00000579186 1945 ntBASIC15.97■□□□□ 0.15
HADHAP40939 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
HADHAP40939 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HADHAP40939 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HADHAP40939 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.97■□□□□ 0.15
HADHAP40939 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.97■□□□□ 0.15
HADHAP40939 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HADHAP40939 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.97■□□□□ 0.15
HADHAP40939 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.96■□□□□ 0.15
HADHAP40939 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HADHAP40939 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HADHAP40939 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.96■□□□□ 0.15
HADHAP40939 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.96■□□□□ 0.15
HADHAP40939 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.96■□□□□ 0.15
HADHAP40939 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.96■□□□□ 0.15
HADHAP40939 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.96■□□□□ 0.15
HADHAP40939 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
HADHAP40939 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 FO393414.2-201ENST00000405153 598 ntBASIC15.96■□□□□ 0.15
HADHAP40939 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.96■□□□□ 0.15
HADHAP40939 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.96■□□□□ 0.15
HADHAP40939 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.96■□□□□ 0.15
HADHAP40939 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HADHAP40939 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 AC067863.1-201ENST00000494933 530 ntBASIC15.96■□□□□ 0.15
HADHAP40939 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HADHAP40939 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.96■□□□□ 0.15
HADHAP40939 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.96■□□□□ 0.15
HADHAP40939 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.96■□□□□ 0.15
HADHAP40939 AL355385.1-201ENST00000606123 409 ntBASIC15.96■□□□□ 0.15
HADHAP40939 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.96■□□□□ 0.15
HADHAP40939 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.96■□□□□ 0.15
HADHAP40939 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.96■□□□□ 0.15
HADHAP40939 Z92544.3-201ENST00000624747 417 ntBASIC15.96■□□□□ 0.15
HADHAP40939 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms