Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC069335.1-201ENST00000489972 472 ntBASIC15.07■□□□□ 0
KRT20P35900 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.07■□□□□ 0
KRT20P35900 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.07■□□□□ 0
KRT20P35900 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.07■□□□□ 0
KRT20P35900 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 AC006486.2-201ENST00000624246 2199 ntBASIC15.07■□□□□ 0
KRT20P35900 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.07■□□□□ 0
KRT20P35900 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.07■□□□□ 0
KRT20P35900 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.06■□□□□ 0
KRT20P35900 AC136621.1-201ENST00000624017 2304 ntBASIC15.06■□□□□ 0
KRT20P35900 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
KRT20P35900 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.06■□□□□ 0
KRT20P35900 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
KRT20P35900 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.06■□□□□ 0
KRT20P35900 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.06■□□□□ 0
KRT20P35900 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
KRT20P35900 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 HLA-H-201ENST00000383620 1096 ntBASIC15.06■□□□□ 0
KRT20P35900 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.06■□□□□ 0
KRT20P35900 AL627223.1-201ENST00000416693 442 ntBASIC15.06■□□□□ 0
KRT20P35900 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.06■□□□□ 0
KRT20P35900 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.06■□□□□ 0
KRT20P35900 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
KRT20P35900 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.06■□□□□ 0
KRT20P35900 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
KRT20P35900 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.06■□□□□ 0
KRT20P35900 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.06■□□□□ 0
KRT20P35900 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.06■□□□□ 0
KRT20P35900 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
KRT20P35900 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
KRT20P35900 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
KRT20P35900 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
KRT20P35900 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.06■□□□□ 0
KRT20P35900 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
KRT20P35900 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
KRT20P35900 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.05■□□□□ 0
KRT20P35900 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
KRT20P35900 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.05■□□□□ 0
KRT20P35900 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
KRT20P35900 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
KRT20P35900 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
KRT20P35900 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
KRT20P35900 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
KRT20P35900 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
KRT20P35900 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.05■□□□□ 0
KRT20P35900 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.05■□□□□ -0
KRT20P35900 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
KRT20P35900 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
KRT20P35900 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.05■□□□□ -0
KRT20P35900 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.05■□□□□ -0
KRT20P35900 DNAJB3-202ENST00000449667 1266 ntBASIC15.05■□□□□ -0
KRT20P35900 AC023141.5-201ENST00000458585 616 ntBASIC15.05■□□□□ -0
KRT20P35900 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.05■□□□□ -0
KRT20P35900 SLC25A39P2-201ENST00000537614 270 ntBASIC15.05■□□□□ -0
KRT20P35900 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.05■□□□□ -0
KRT20P35900 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
KRT20P35900 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
KRT20P35900 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
KRT20P35900 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KRT20P35900 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.05■□□□□ -0
KRT20P35900 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.05■□□□□ -0
KRT20P35900 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KRT20P35900 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.05■□□□□ -0
KRT20P35900 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.05■□□□□ -0
KRT20P35900 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.05■□□□□ -0
KRT20P35900 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
KRT20P35900 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.05■□□□□ -0
KRT20P35900 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.05■□□□□ -0
KRT20P35900 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
KRT20P35900 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.05■□□□□ -0
KRT20P35900 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
KRT20P35900 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.05■□□□□ -0
KRT20P35900 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms