Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.7■□□□□ 0.26
CTNNA1P35221 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTNNA1P35221 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTNNA1P35221 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTNNA1P35221 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.7■□□□□ 0.26
CTNNA1P35221 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTNNA1P35221 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CTNNA1P35221 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTNNA1P35221 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTNNA1P35221 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTNNA1P35221 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CTNNA1P35221 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTNNA1P35221 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.69■□□□□ 0.26
CTNNA1P35221 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.69■□□□□ 0.26
CTNNA1P35221 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.69■□□□□ 0.26
CTNNA1P35221 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CTNNA1P35221 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTNNA1P35221 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTNNA1P35221 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTNNA1P35221 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTNNA1P35221 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CTNNA1P35221 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTNNA1P35221 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTNNA1P35221 AC127383.1-201ENST00000444697 1800 ntBASIC16.69■□□□□ 0.26
CTNNA1P35221 AC007292.2-201ENST00000593524 1812 ntBASIC16.69■□□□□ 0.26
CTNNA1P35221 MIR346-201ENST00000362234 95 ntBASIC16.69■□□□□ 0.26
CTNNA1P35221 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.69■□□□□ 0.26
CTNNA1P35221 EEF1DP4-201ENST00000446006 880 ntBASIC16.69■□□□□ 0.26
CTNNA1P35221 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTNNA1P35221 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.69■□□□□ 0.26
CTNNA1P35221 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.69■□□□□ 0.26
CTNNA1P35221 FAM86C2P-203ENST00000528684 1004 ntBASIC16.69■□□□□ 0.26
CTNNA1P35221 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.69■□□□□ 0.26
CTNNA1P35221 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.69■□□□□ 0.26
CTNNA1P35221 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
CTNNA1P35221 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CTNNA1P35221 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CTNNA1P35221 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTNNA1P35221 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTNNA1P35221 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CTNNA1P35221 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTNNA1P35221 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.69■□□□□ 0.26
CTNNA1P35221 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTNNA1P35221 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.69■□□□□ 0.26
CTNNA1P35221 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTNNA1P35221 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.68■□□□□ 0.26
CTNNA1P35221 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.68■□□□□ 0.26
CTNNA1P35221 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.68■□□□□ 0.26
CTNNA1P35221 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.68■□□□□ 0.26
CTNNA1P35221 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.68■□□□□ 0.26
CTNNA1P35221 AC243562.1-201ENST00000560672 389 ntBASIC16.68■□□□□ 0.26
CTNNA1P35221 AP000842.3-202ENST00000569238 1080 ntBASIC16.68■□□□□ 0.26
CTNNA1P35221 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.68■□□□□ 0.26
CTNNA1P35221 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.68■□□□□ 0.26
CTNNA1P35221 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CTNNA1P35221 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.68■□□□□ 0.26
CTNNA1P35221 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CTNNA1P35221 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CTNNA1P35221 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.68■□□□□ 0.26
CTNNA1P35221 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 CYP4F24P-201ENST00000586049 1580 ntBASIC16.68■□□□□ 0.26
CTNNA1P35221 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CTNNA1P35221 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.68■□□□□ 0.26
CTNNA1P35221 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTNNA1P35221 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTNNA1P35221 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTNNA1P35221 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTNNA1P35221 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms