Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.87■□□□□ 0.13
LSP1P33241 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.87■□□□□ 0.13
LSP1P33241 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.87■□□□□ 0.13
LSP1P33241 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.87■□□□□ 0.13
LSP1P33241 WASH3P-207ENST00000560956 1394 ntBASIC15.87■□□□□ 0.13
LSP1P33241 FO538757.1-201ENST00000623083 1397 ntBASIC15.87■□□□□ 0.13
LSP1P33241 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.87■□□□□ 0.13
LSP1P33241 AC011474.4-201ENST00000623523 2076 ntBASIC15.87■□□□□ 0.13
LSP1P33241 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.87■□□□□ 0.13
LSP1P33241 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LSP1P33241 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 MIR600HG-201ENST00000449175 5984 ntBASIC15.86■□□□□ 0.13
LSP1P33241 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
LSP1P33241 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.86■□□□□ 0.13
LSP1P33241 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.86■□□□□ 0.13
LSP1P33241 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
LSP1P33241 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.86■□□□□ 0.13
LSP1P33241 KRT18P35-201ENST00000510488 1269 ntBASIC15.86■□□□□ 0.13
LSP1P33241 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.86■□□□□ 0.13
LSP1P33241 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
LSP1P33241 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LSP1P33241 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LSP1P33241 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.86■□□□□ 0.13
LSP1P33241 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LSP1P33241 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.86■□□□□ 0.13
LSP1P33241 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 AC233702.3-201ENST00000578656 1387 ntBASIC15.86■□□□□ 0.13
LSP1P33241 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LSP1P33241 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.86■□□□□ 0.13
LSP1P33241 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSP1P33241 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.85■□□□□ 0.13
LSP1P33241 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.85■□□□□ 0.13
LSP1P33241 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.85■□□□□ 0.13
LSP1P33241 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.85■□□□□ 0.13
LSP1P33241 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.85■□□□□ 0.13
LSP1P33241 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
LSP1P33241 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.85■□□□□ 0.13
LSP1P33241 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LSP1P33241 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 AL445228.2-201ENST00000605589 952 ntBASIC15.85■□□□□ 0.13
LSP1P33241 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.85■□□□□ 0.13
LSP1P33241 AL589182.2-201ENST00000619332 1049 ntBASIC15.85■□□□□ 0.13
LSP1P33241 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LSP1P33241 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.85■□□□□ 0.13
LSP1P33241 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.85■□□□□ 0.13
LSP1P33241 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LSP1P33241 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.85■□□□□ 0.13
LSP1P33241 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.85■□□□□ 0.13
LSP1P33241 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.85■□□□□ 0.13
LSP1P33241 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSP1P33241 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LSP1P33241 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.84■□□□□ 0.13
LSP1P33241 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.84■□□□□ 0.13
LSP1P33241 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.84■□□□□ 0.13
LSP1P33241 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LSP1P33241 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.84■□□□□ 0.13
LSP1P33241 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSP1P33241 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LSP1P33241 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.84■□□□□ 0.13
LSP1P33241 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSP1P33241 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms