Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 MST1L-201ENST00000442552 2185 ntBASIC15.9■□□□□ 0.14
HLA-FP30511 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-FP30511 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-FP30511 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
HLA-FP30511 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-FP30511 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HLA-FP30511 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-FP30511 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HLA-FP30511 PRAL-201ENST00000624952 3286 ntBASIC15.9■□□□□ 0.14
HLA-FP30511 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-FP30511 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
HLA-FP30511 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HLA-FP30511 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HLA-FP30511 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-FP30511 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
HLA-FP30511 AC026691.1-201ENST00000602502 2017 ntBASIC15.89■□□□□ 0.13
HLA-FP30511 AC092127.1-201ENST00000567093 3455 ntBASIC15.89■□□□□ 0.13
HLA-FP30511 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-FP30511 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-FP30511 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-FP30511 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HLA-FP30511 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-FP30511 AC093433.1-201ENST00000458048 571 ntBASIC15.89■□□□□ 0.13
HLA-FP30511 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 AP001889.1-201ENST00000525414 633 ntBASIC15.89■□□□□ 0.13
HLA-FP30511 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-FP30511 AP001063.1-201ENST00000568332 529 ntBASIC15.89■□□□□ 0.13
HLA-FP30511 AC009486.1-201ENST00000569860 813 ntBASIC15.89■□□□□ 0.13
HLA-FP30511 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-FP30511 MIR4259-201ENST00000584466 101 ntBASIC15.89■□□□□ 0.13
HLA-FP30511 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HLA-FP30511 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.89■□□□□ 0.13
HLA-FP30511 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HLA-FP30511 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HLA-FP30511 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-FP30511 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HLA-FP30511 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HLA-FP30511 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-FP30511 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-FP30511 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 DOC2GP-204ENST00000639052 2548 ntBASIC15.88■□□□□ 0.13
HLA-FP30511 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 ANKRD19P-201ENST00000338192 862 ntBASIC15.88■□□□□ 0.13
HLA-FP30511 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HLA-FP30511 AC005229.1-201ENST00000392885 409 ntBASIC15.88■□□□□ 0.13
HLA-FP30511 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HLA-FP30511 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-FP30511 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-FP30511 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-FP30511 KRT43P-201ENST00000434019 910 ntBASIC15.88■□□□□ 0.13
HLA-FP30511 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-FP30511 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-FP30511 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-FP30511 BCRP2-202ENST00000447763 634 ntBASIC15.88■□□□□ 0.13
HLA-FP30511 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-FP30511 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HLA-FP30511 BCRP6-201ENST00000510112 632 ntBASIC15.88■□□□□ 0.13
HLA-FP30511 BCRP7-201ENST00000511549 544 ntBASIC15.88■□□□□ 0.13
HLA-FP30511 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HLA-FP30511 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-FP30511 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-FP30511 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-FP30511 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-FP30511 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-FP30511 AL022328.1-201ENST00000610050 478 ntBASIC15.88■□□□□ 0.13
HLA-FP30511 MIR6775-201ENST00000617557 69 ntBASIC15.88■□□□□ 0.13
HLA-FP30511 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-FP30511 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-FP30511 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-FP30511 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms