Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 ANLN-204ENST00000424865 596 ntTSL 37.15□□□□□ -1.265e-6■□□□□ 11.1
RPS3P23396 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.88□□□□□ -1.315e-6■□□□□ 11.1
RPS3P23396 PSMD4-210ENST00000470396 338 ntTSL 1 (best)6.67□□□□□ -1.345e-6■□□□□ 11.1
RPS3P23396 DDX3X-207ENST00000610559 542 ntTSL 46.61□□□□□ -1.355e-6■□□□□ 11.1
RPS3P23396 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.385e-6■□□□□ 11.1
RPS3P23396 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.45□□□□□ -1.385e-6■□□□□ 11.1
RPS3P23396 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.385e-6■□□□□ 11.1
RPS3P23396 DECR1-202ENST00000517301 464 ntTSL 36.31□□□□□ -1.45e-6■□□□□ 11.1
RPS3P23396 TFDP2-204ENST00000467667 865 ntTSL 36.11□□□□□ -1.435e-6■□□□□ 11.1
RPS3P23396 CSDE1-207ENST00000483407 741 ntTSL 25.55□□□□□ -1.525e-6■□□□□ 11.1
RPS3P23396 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.47□□□□□ -1.535e-6■□□□□ 11.1
RPS3P23396 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.65e-6■□□□□ 11.1
RPS3P23396 MAP4-216ENST00000633710 570 ntTSL 55.02□□□□□ -1.615e-6■□□□□ 11.1
RPS3P23396 DTL-202ENST00000463791 557 ntTSL 24.89□□□□□ -1.635e-6■□□□□ 11.1
RPS3P23396 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.65□□□□□ -1.665e-6■□□□□ 11.1
RPS3P23396 NUP205-206ENST00000477620 1800 ntTSL 54.41□□□□□ -1.75e-6■□□□□ 11.1
RPS3P23396 POLR2B-208ENST00000478188 3093 ntTSL 24.13□□□□□ -1.755e-6■□□□□ 11.1
RPS3P23396 C7orf73-204ENST00000515197 617 ntTSL 23.9□□□□□ -1.795e-6■□□□□ 11.1
RPS3P23396 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.795e-6■□□□□ 11.1
RPS3P23396 POLR2B-207ENST00000464918 444 ntTSL 21.33□□□□□ -2.25e-6■□□□□ 11.1
RPS3P23396 RPS15A-204ENST00000563579 284 ntTSL 30.06□□□□□ -2.42e-6■□□□□ 11.1
RPS3P23396 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.017e-9■□□□□ 11.1
RPS3P23396 PUF60-205ENST00000524570 1934 ntTSL 216.41■□□□□ 0.222e-8■□□□□ 11.1
RPS3P23396 PUF60-220ENST00000532884 819 ntTSL 514.04□□□□□ -0.162e-8■□□□□ 11.1
RPS3P23396 KIF2C-207ENST00000480574 783 ntTSL 510.75□□□□□ -0.692e-6■□□□□ 11.1
RPS3P23396 RPL13-212ENST00000563749 2367 nt21.79■■□□□ 1.081e-18■□□□□ 11.1
RPS3P23396 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.011e-18■□□□□ 11.1
RPS3P23396 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.141e-18■□□□□ 11.1
RPS3P23396 RPL13-210ENST00000562879 958 ntTSL 1 (best)14.78□□□□□ -0.041e-18■□□□□ 11.1
RPS3P23396 RPL13-207ENST00000484610 924 ntTSL 514.73□□□□□ -0.051e-18■□□□□ 11.1
RPS3P23396 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.5□□□□□ -0.091e-18■□□□□ 11.1
RPS3P23396 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51e-18■□□□□ 11.1
RPS3P23396 ATP1B1-203ENST00000494797 718 ntTSL 210.88□□□□□ -0.671e-6■□□□□ 11.1
RPS3P23396 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.969e-7■□□□□ 11.1
RPS3P23396 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.74■□□□□ 0.599e-7■□□□□ 11.1
RPS3P23396 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.831e-8■□□□□ 11.1
RPS3P23396 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.572e-29■□□□□ 11.1
RPS3P23396 RANBP1-204ENST00000416427 645 ntTSL 524.08■■□□□ 1.451e-8■□□□□ 11.1
RPS3P23396 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.362e-16■□□□□ 11.1
RPS3P23396 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.161e-8■□□□□ 11.1
RPS3P23396 AL121845.3-203ENST00000496820 507 ntTSL 522.16■■□□□ 1.142e-16■□□□□ 11.1
RPS3P23396 LMNB2-204ENST00000527409 838 ntTSL 521.87■■□□□ 1.091e-8■□□□□ 11.1
RPS3P23396 AL121845.3-202ENST00000632538 872 ntAPPRIS P1 TSL 320.89■□□□□ 0.932e-16■□□□□ 11.1
RPS3P23396 LMNB2-206ENST00000534495 491 ntTSL 320.68■□□□□ 0.91e-8■□□□□ 11.1
RPS3P23396 LIME1-207ENST00000489212 559 ntTSL 520.53■□□□□ 0.882e-16■□□□□ 11.1
RPS3P23396 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.51■□□□□ 0.871e-8■□□□□ 11.1
RPS3P23396 RANBP1-210ENST00000435265 1879 ntTSL 219.39■□□□□ 0.692e-29■□□□□ 11.1
RPS3P23396 ERF-203ENST00000593944 555 ntTSL 417.97■□□□□ 0.471e-8■□□□□ 11.1
RPS3P23396 RANBP1-207ENST00000423859 832 ntTSL 317.83■□□□□ 0.441e-8■□□□□ 11.1
RPS3P23396 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.21e-8■□□□□ 11.1
RPS3P23396 MAP3K11-206ENST00000527304 5605 nt16.13■□□□□ 0.171e-8■□□□□ 11.1
RPS3P23396 RANBP1-205ENST00000418705 932 ntTSL 316.04■□□□□ 0.161e-8■□□□□ 11.1
RPS3P23396 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.141e-8■□□□□ 11.1
RPS3P23396 APEH-206ENST00000447541 708 ntTSL 315.49■□□□□ 0.071e-8■□□□□ 11.1
RPS3P23396 ERF-206ENST00000596818 566 ntTSL 315.21■□□□□ 0.031e-8■□□□□ 11.1
RPS3P23396 RANBP1-206ENST00000421656 333 ntTSL 315.14■□□□□ 0.011e-8■□□□□ 11.1
RPS3P23396 MAP3K11-203ENST00000524856 3787 ntTSL 215.02□□□□□ -0.011e-8■□□□□ 11.1
RPS3P23396 ACY1-218ENST00000637034 745 ntTSL 315.01□□□□□ -0.011e-8■□□□□ 11.1
RPS3P23396 ACY1-226ENST00000637746 685 ntTSL 215.01□□□□□ -0.011e-8■□□□□ 11.1
RPS3P23396 RANBP1-214ENST00000488484 699 ntTSL 214.92□□□□□ -0.022e-29■□□□□ 11.1
RPS3P23396 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.041e-8■□□□□ 11.1
RPS3P23396 RANBP1-203ENST00000411892 584 ntTSL 214.5□□□□□ -0.092e-29■□□□□ 11.1
RPS3P23396 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.43□□□□□ -0.12e-29■□□□□ 11.1
RPS3P23396 RANBP1-209ENST00000432879 744 ntTSL 314.16□□□□□ -0.142e-29■□□□□ 11.1
RPS3P23396 MAP3K11-204ENST00000526293 571 ntTSL 414.16□□□□□ -0.141e-8■□□□□ 11.1
RPS3P23396 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.142e-29■□□□□ 11.1
RPS3P23396 MAP3K11-207ENST00000529839 561 ntTSL 414.09□□□□□ -0.151e-8■□□□□ 11.1
RPS3P23396 ERF-207ENST00000598965 264 ntTSL 313.63□□□□□ -0.231e-8■□□□□ 11.1
RPS3P23396 ACY1-219ENST00000637102 1488 ntTSL 313.62□□□□□ -0.231e-8■□□□□ 11.1
RPS3P23396 MRS2-206ENST00000483634 1750 ntTSL 213.52□□□□□ -0.251e-8■□□□□ 11.1
RPS3P23396 MRS2-203ENST00000378386 3313 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.531e-8■□□□□ 11.1
RPS3P23396 ACY1-220ENST00000637149 386 ntTSL 311.52□□□□□ -0.571e-8■□□□□ 11.1
RPS3P23396 RAB5C-208ENST00000551338 560 ntTSL 211.44□□□□□ -0.581e-8■□□□□ 11.1
RPS3P23396 CYB5A-201ENST00000299438 718 ntTSL 2 BASIC11.33□□□□□ -0.61e-8■□□□□ 11.1
RPS3P23396 MRS2-204ENST00000443868 3980 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.751e-8■□□□□ 11.1
RPS3P23396 MRS2-201ENST00000274747 3821 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.821e-8■□□□□ 11.1
RPS3P23396 ERF-205ENST00000595941 227 ntTSL 48.09□□□□□ -1.111e-8■□□□□ 11.1
RPS3P23396 DNAJA1-203ENST00000495015 604 ntTSL 37.62□□□□□ -1.191e-8■□□□□ 11.1
RPS3P23396 CYB5A-205ENST00000579064 305 ntTSL 26.54□□□□□ -1.361e-8■□□□□ 11.1
RPS3P23396 CYB5A-206ENST00000580678 1173 ntTSL 1 (best)5.27□□□□□ -1.571e-8■□□□□ 11.1
RPS3P23396 HSD17B4-217ENST00000512029 413 ntTSL 23.57□□□□□ -1.841e-8■□□□□ 11.1
RPS3P23396 HSD17B4-225ENST00000520216 510 ntTSL 32.36□□□□□ -2.031e-8■□□□□ 11.1
RPS3P23396 EIF4G2-231ENST00000534605 198 ntTSL 3-2.92□□□□□ -2.881e-8■□□□□ 11.1
RPS3P23396 POR-210ENST00000439297 569 ntTSL 413.75□□□□□ -0.212e-13■□□□□ 11.1
RPS3P23396 GLG1-211ENST00000566601 2536 ntTSL 29.55□□□□□ -0.887e-9■□□□□ 11.1
RPS3P23396 GLG1-207ENST00000563432 555 ntTSL 36.59□□□□□ -1.357e-9■□□□□ 11.1
RPS3P23396 RPL13-203ENST00000399461 879 ntTSL 221.61■■□□□ 1.051e-18■□□□□ 11.1
RPS3P23396 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.67□□□□□ -1.184e-8■□□□□ 11.1
RPS3P23396 RPL13-208ENST00000487034 615 ntTSL 1 (best)21.76■■□□□ 1.075e-23■□□□□ 11.1
RPS3P23396 CFB-283ENST00000497841 736 ntTSL 37.7□□□□□ -1.181e-11■□□□□ 11.1
RPS3P23396 YWHAQ-203ENST00000446619 665 ntTSL 320.45■□□□□ 0.861e-8■□□□□ 11.1
RPS3P23396 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.155e-8■□□□□ 11.1
RPS3P23396 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.923e-7■□□□□ 11.1
RPS3P23396 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.363e-7■□□□□ 11.1
RPS3P23396 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.05■□□□□ 0.86e-8■□□□□ 11.1
RPS3P23396 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.22■□□□□ 0.516e-8■□□□□ 11.1
RPS3P23396 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.476e-8■□□□□ 11.1
RPS3P23396 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.13□□□□□ -0.156e-8■□□□□ 11.1
RPS3P23396 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.581e-6■□□□□ 11.1
RPS3P23396 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.92e-10■□□□□ 11.1
Retrieved 100 of 24,271 protein–RNA pairs in 520.7 ms