RNA–Protein interactions for RNA: ENST00000464918.1

POLR2B-207, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-207ENST00000464918 AEBP2Q6ZN18 517 aaPredicted RBP20.13■□□□□ 0.81
POLR2B-207ENST00000464918 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
POLR2B-207ENST00000464918 PHF23Q9BUL5 403 aaPredicted RBP17.56■□□□□ 0.4
POLR2B-207ENST00000464918 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
POLR2B-207ENST00000464918 PLPPR3Q6T4P5 718 aa16.25■□□□□ 0.19
POLR2B-207ENST00000464918 FOXD1Q16676 465 aa15.76■□□□□ 0.11
POLR2B-207ENST00000464918 PPP6R1Q9UPN7 881 aa15.41■□□□□ 0.06
POLR2B-207ENST00000464918 ADRA2BP18089 450 aa15.37■□□□□ 0.05
POLR2B-207ENST00000464918 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
POLR2B-207ENST00000464918 MSH5O43196 834 aa14.37□□□□□ -0.11
POLR2B-207ENST00000464918 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
POLR2B-207ENST00000464918 KCNA4P22459 653 aa14.36□□□□□ -0.11
POLR2B-207ENST00000464918 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
POLR2B-207ENST00000464918 SCAF1Q9H7N4 1312 aaKnown RBP14.01□□□□□ -0.17
POLR2B-207ENST00000464918 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
POLR2B-207ENST00000464918 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
POLR2B-207ENST00000464918 NPM3O75607 178 aaKnown RBP13.87□□□□□ -0.19
POLR2B-207ENST00000464918 SLC4A1APQ9BWU0 796 aaKnown RBP13.69□□□□□ -0.22
POLR2B-207ENST00000464918 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
POLR2B-207ENST00000464918 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
POLR2B-207ENST00000464918 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
POLR2B-207ENST00000464918 DNAJC5BQ9UF47 199 aa13.47□□□□□ -0.25
POLR2B-207ENST00000464918 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.25
POLR2B-207ENST00000464918 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
POLR2B-207ENST00000464918 ZBTB22O15209 634 aa13.25□□□□□ -0.29
POLR2B-207ENST00000464918 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
POLR2B-207ENST00000464918 SLC4A2P04920 1241 aa13.06□□□□□ -0.32
POLR2B-207ENST00000464918 DCAF8L1A6NGE4 600 aa12.94□□□□□ -0.34
POLR2B-207ENST00000464918 MYCNP04198 464 aaPredicted RBP12.78□□□□□ -0.36
POLR2B-207ENST00000464918 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
POLR2B-207ENST00000464918 ATXN8OSP0DMR3 200 aa12.64□□□□□ -0.39
POLR2B-207ENST00000464918 POTEDQ86YR6 584 aa12.64□□□□□ -0.39
POLR2B-207ENST00000464918 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
POLR2B-207ENST00000464918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
POLR2B-207ENST00000464918 HNRNPUL2Q1KMD3 747 aaKnown RBP12.51□□□□□ -0.41
POLR2B-207ENST00000464918 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
POLR2B-207ENST00000464918 ATF5Q9Y2D1 282 aaPredicted RBP12.48□□□□□ -0.41
POLR2B-207ENST00000464918 RNF39Q9H2S5 420 aa12.38□□□□□ -0.43
POLR2B-207ENST00000464918 APLP2Q06481 763 aa12.29□□□□□ -0.44
POLR2B-207ENST00000464918 C1QBPQ07021 282 aaKnown RBP12.22□□□□□ -0.45
POLR2B-207ENST00000464918 ZNF219Q9P2Y4 722 aaPredicted RBP12.21□□□□□ -0.45
POLR2B-207ENST00000464918 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
POLR2B-207ENST00000464918 TRHP20396 242 aaPredicted RBP12.1□□□□□ -0.47
POLR2B-207ENST00000464918 CAPN15O75808 1086 aa12.08□□□□□ -0.48
POLR2B-207ENST00000464918 FKBP8Q14318 412 aa12.03□□□□□ -0.48
POLR2B-207ENST00000464918 POLA2Q14181 598 aa12□□□□□ -0.49
POLR2B-207ENST00000464918 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
POLR2B-207ENST00000464918 ABCB7O75027 752 aa11.9□□□□□ -0.5
POLR2B-207ENST00000464918 DSG3P32926 999 aa11.88□□□□□ -0.51
POLR2B-207ENST00000464918 FBLN2P98095 1184 aa11.85□□□□□ -0.51
POLR2B-207ENST00000464918 CACNB1Q02641 598 aaPredicted RBP11.81□□□□□ -0.52
POLR2B-207ENST00000464918 ZBTB12Q9Y330 459 aaPredicted RBP11.78□□□□□ -0.52
POLR2B-207ENST00000464918 SPDYE4A6NLX3 237 aa11.76□□□□□ -0.53
POLR2B-207ENST00000464918 PROM2Q8N271 834 aa11.67□□□□□ -0.54
POLR2B-207ENST00000464918 OSCARQ8IYS5 282 aa11.57□□□□□ -0.56
POLR2B-207ENST00000464918 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
POLR2B-207ENST00000464918 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
POLR2B-207ENST00000464918 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
POLR2B-207ENST00000464918 ZNF692Q9BU19 519 aaPredicted RBP11.51□□□□□ -0.57
POLR2B-207ENST00000464918 FBXO3Q9UK99 471 aa11.51□□□□□ -0.57
POLR2B-207ENST00000464918 SSUH2Q9Y2M2 353 aa11.49□□□□□ -0.57
POLR2B-207ENST00000464918 RTN4Q9NQC3 1192 aaKnown RBP11.45□□□□□ -0.58
POLR2B-207ENST00000464918 AMER1Q5JTC6 1135 aaPredicted RBP11.43□□□□□ -0.58
POLR2B-207ENST00000464918 VASPP50552 380 aaPredicted RBP11.37□□□□□ -0.59
POLR2B-207ENST00000464918 PABPN1Q86U42 306 aaKnown RBP eCLIP11.37□□□□□ -0.59
POLR2B-207ENST00000464918 IFNLR1Q8IU57 520 aaPredicted RBP11.27□□□□□ -0.61
POLR2B-207ENST00000464918 RBM42Q9BTD8 480 aaKnown RBP11.25□□□□□ -0.61
POLR2B-207ENST00000464918 STAG3Q9UJ98 1225 aa11.25□□□□□ -0.61
POLR2B-207ENST00000464918 AKT1S1Q96B36 256 aa11.2□□□□□ -0.62
POLR2B-207ENST00000464918 REM2Q8IYK8 340 aaPredicted RBP11.11□□□□□ -0.63
POLR2B-207ENST00000464918 MIER1Q8N108 512 aa11.11□□□□□ -0.63
POLR2B-207ENST00000464918 PLCD3Q8N3E9 789 aa11.1□□□□□ -0.63
POLR2B-207ENST00000464918 SPDYE1Q8NFV5 336 aaPredicted RBP11.09□□□□□ -0.63
POLR2B-207ENST00000464918 KLHL34Q8N239 644 aa11.07□□□□□ -0.64
POLR2B-207ENST00000464918 SPOCK2Q92563 424 aa11.04□□□□□ -0.64
POLR2B-207ENST00000464918 CLEC11AQ9Y240 323 aa11.02□□□□□ -0.65
POLR2B-207ENST00000464918 PKD2Q13563 968 aa11□□□□□ -0.65
POLR2B-207ENST00000464918 PITPNM1O00562 1244 aa10.98□□□□□ -0.65
POLR2B-207ENST00000464918 PLEKHG5O94827 1062 aa10.98□□□□□ -0.65
POLR2B-207ENST00000464918 PRR29P0C7W0 189 aa10.97□□□□□ -0.65
POLR2B-207ENST00000464918 ZBTB47Q9UFB7 747 aaPredicted RBP10.96□□□□□ -0.65
POLR2B-207ENST00000464918 CREBZFQ9NS37 354 aa10.94□□□□□ -0.66
POLR2B-207ENST00000464918 MNX1P50219 401 aaPredicted RBP10.89□□□□□ -0.67
POLR2B-207ENST00000464918 NUBP1P53384 320 aa10.84□□□□□ -0.67
POLR2B-207ENST00000464918 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
POLR2B-207ENST00000464918 CIZ1Q9ULV3 898 aaPredicted RBP10.8□□□□□ -0.68
POLR2B-207ENST00000464918 SLC24A1O60721 1099 aa10.76□□□□□ -0.69
POLR2B-207ENST00000464918 CHADLQ6NUI6 762 aa10.76□□□□□ -0.69
POLR2B-207ENST00000464918 RGL2O15211 777 aa10.75□□□□□ -0.69
POLR2B-207ENST00000464918 DCAF8L2P0C7V8 631 aa10.74□□□□□ -0.69
POLR2B-207ENST00000464918 FXR2P51116 673 aaKnown RBP eCLIP10.74□□□□□ -0.69
POLR2B-207ENST00000464918 GSE1Q14687 1217 aa10.74□□□□□ -0.69
POLR2B-207ENST00000464918 RASEFQ8IZ41 740 aa10.72□□□□□ -0.69
POLR2B-207ENST00000464918 TRIM41Q8WV44 630 aa10.72□□□□□ -0.69
POLR2B-207ENST00000464918 DCAF8Q5TAQ9 597 aa10.71□□□□□ -0.69
POLR2B-207ENST00000464918 CHRDL2Q6WN34 429 aa10.71□□□□□ -0.69
POLR2B-207ENST00000464918 NPM1P06748 294 aaKnown RBP eCLIP10.7□□□□□ -0.7
POLR2B-207ENST00000464918 PRKAR2AP13861 404 aaKnown RBP10.69□□□□□ -0.7
POLR2B-207ENST00000464918 FAM212AQ96EL1 285 aa10.69□□□□□ -0.7
POLR2B-207ENST00000464918 FARP1Q9Y4F1 1045 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms