Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 RNA5SP421-201ENST00000516864 134 ntBASIC15.91■□□□□ 0.14
VCLP18206 DUX4L27-201ENST00000554796 1261 ntBASIC15.91■□□□□ 0.14
VCLP18206 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.91■□□□□ 0.14
VCLP18206 RN7SL828P-201ENST00000607615 303 ntBASIC15.91■□□□□ 0.14
VCLP18206 AC073592.8-201ENST00000624126 511 ntBASIC15.91■□□□□ 0.14
VCLP18206 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.91■□□□□ 0.14
VCLP18206 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
VCLP18206 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.91■□□□□ 0.14
VCLP18206 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
VCLP18206 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.91■□□□□ 0.14
VCLP18206 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.91■□□□□ 0.14
VCLP18206 AC112504.1-201ENST00000623415 1841 ntBASIC15.91■□□□□ 0.14
VCLP18206 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VCLP18206 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VCLP18206 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VCLP18206 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VCLP18206 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VCLP18206 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VCLP18206 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VCLP18206 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VCLP18206 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VCLP18206 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VCLP18206 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.91■□□□□ 0.14
VCLP18206 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.91■□□□□ 0.14
VCLP18206 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VCLP18206 AC063926.3-201ENST00000624734 5658 ntBASIC15.9■□□□□ 0.14
VCLP18206 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.9■□□□□ 0.14
VCLP18206 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
VCLP18206 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.9■□□□□ 0.14
VCLP18206 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
VCLP18206 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
VCLP18206 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 HAUS4P1-201ENST00000406739 1145 ntBASIC15.9■□□□□ 0.14
VCLP18206 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
VCLP18206 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 BASP1P1-201ENST00000430708 665 ntBASIC15.9■□□□□ 0.14
VCLP18206 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.9■□□□□ 0.14
VCLP18206 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.9■□□□□ 0.14
VCLP18206 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.9■□□□□ 0.14
VCLP18206 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.9■□□□□ 0.14
VCLP18206 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.9■□□□□ 0.14
VCLP18206 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.9■□□□□ 0.14
VCLP18206 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.9■□□□□ 0.14
VCLP18206 AC011467.4-201ENST00000594891 528 ntBASIC15.9■□□□□ 0.14
VCLP18206 AL589739.1-201ENST00000607720 493 ntBASIC15.9■□□□□ 0.14
VCLP18206 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VCLP18206 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VCLP18206 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
VCLP18206 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.9■□□□□ 0.14
VCLP18206 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.9■□□□□ 0.14
VCLP18206 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VCLP18206 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.89■□□□□ 0.13
VCLP18206 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.89■□□□□ 0.13
VCLP18206 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 NORAD-201ENST00000565493 5339 ntBASIC15.89■□□□□ 0.13
VCLP18206 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
VCLP18206 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.89■□□□□ 0.13
VCLP18206 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.89■□□□□ 0.13
VCLP18206 TREML5P-201ENST00000421694 576 ntBASIC15.89■□□□□ 0.13
VCLP18206 AC055876.3-201ENST00000431496 288 ntBASIC15.89■□□□□ 0.13
VCLP18206 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
VCLP18206 HLA-V-204ENST00000476601 1289 ntBASIC15.89■□□□□ 0.13
VCLP18206 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.89■□□□□ 0.13
VCLP18206 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 AC138649.4-201ENST00000612222 287 ntBASIC15.89■□□□□ 0.13
VCLP18206 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.89■□□□□ 0.13
VCLP18206 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.89■□□□□ 0.13
VCLP18206 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
VCLP18206 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VCLP18206 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms