Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCNAP12004 BNIP3P1-202ENST00000550043 1585 ntBASIC15.43■□□□□ 0.06
PCNAP12004 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCNAP12004 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCNAP12004 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCNAP12004 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.43■□□□□ 0.06
PCNAP12004 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCNAP12004 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCNAP12004 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCNAP12004 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCNAP12004 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCNAP12004 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PCNAP12004 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PCNAP12004 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.42■□□□□ 0.06
PCNAP12004 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
PCNAP12004 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PCNAP12004 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.42■□□□□ 0.06
PCNAP12004 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.42■□□□□ 0.06
PCNAP12004 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PCNAP12004 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.42■□□□□ 0.06
PCNAP12004 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PCNAP12004 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.42■□□□□ 0.06
PCNAP12004 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.42■□□□□ 0.06
PCNAP12004 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.42■□□□□ 0.06
PCNAP12004 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PCNAP12004 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.42■□□□□ 0.06
PCNAP12004 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.42■□□□□ 0.06
PCNAP12004 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.42■□□□□ 0.06
PCNAP12004 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.42■□□□□ 0.06
PCNAP12004 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.42■□□□□ 0.06
PCNAP12004 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PCNAP12004 AC093520.2-201ENST00000561830 333 ntBASIC15.42■□□□□ 0.06
PCNAP12004 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 AC003101.2-201ENST00000612557 442 ntBASIC15.42■□□□□ 0.06
PCNAP12004 PCDHA3-202ENST00000532566 4594 ntBASIC15.42■□□□□ 0.06
PCNAP12004 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 CICP13-201ENST00000422015 2789 ntBASIC15.42■□□□□ 0.06
PCNAP12004 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.42■□□□□ 0.06
PCNAP12004 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PCNAP12004 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.42■□□□□ 0.06
PCNAP12004 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCNAP12004 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.42■□□□□ 0.06
PCNAP12004 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.42■□□□□ 0.06
PCNAP12004 AC136621.1-201ENST00000624017 2304 ntBASIC15.42■□□□□ 0.06
PCNAP12004 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.41■□□□□ 0.06
PCNAP12004 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.41■□□□□ 0.06
PCNAP12004 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCNAP12004 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.41■□□□□ 0.06
PCNAP12004 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.41■□□□□ 0.06
PCNAP12004 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PCNAP12004 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCNAP12004 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.41■□□□□ 0.06
PCNAP12004 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCNAP12004 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.41■□□□□ 0.06
PCNAP12004 AC004987.2-201ENST00000395959 1148 ntBASIC15.41■□□□□ 0.06
PCNAP12004 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.41■□□□□ 0.06
PCNAP12004 RPS8P6-201ENST00000426177 609 ntBASIC15.41■□□□□ 0.06
PCNAP12004 AL353705.2-201ENST00000428243 662 ntBASIC15.41■□□□□ 0.06
PCNAP12004 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.41■□□□□ 0.06
PCNAP12004 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.41■□□□□ 0.06
PCNAP12004 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.41■□□□□ 0.06
PCNAP12004 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.41■□□□□ 0.06
PCNAP12004 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.41■□□□□ 0.06
PCNAP12004 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCNAP12004 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms