Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC20.25■□□□□ 0.83
MS4A1P11836 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 AC112693.3-201ENST00000624819 1983 ntBASIC20.25■□□□□ 0.83
MS4A1P11836 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 CICP23-201ENST00000605013 2741 ntBASIC20.25■□□□□ 0.83
MS4A1P11836 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 AC136604.1-201ENST00000418535 575 ntBASIC20.25■□□□□ 0.83
MS4A1P11836 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.25■□□□□ 0.83
MS4A1P11836 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.25■□□□□ 0.83
MS4A1P11836 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.25■□□□□ 0.83
MS4A1P11836 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.25■□□□□ 0.83
MS4A1P11836 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
MS4A1P11836 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
MS4A1P11836 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 RN7SL828P-201ENST00000607615 303 ntBASIC20.25■□□□□ 0.83
MS4A1P11836 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.25■□□□□ 0.83
MS4A1P11836 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC20.25■□□□□ 0.83
MS4A1P11836 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
MS4A1P11836 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
MS4A1P11836 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A1P11836 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC20.25■□□□□ 0.83
MS4A1P11836 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MS4A1P11836 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC20.24■□□□□ 0.83
MS4A1P11836 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.24■□□□□ 0.83
MS4A1P11836 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.24■□□□□ 0.83
MS4A1P11836 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
MS4A1P11836 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.24■□□□□ 0.83
MS4A1P11836 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
MS4A1P11836 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.24■□□□□ 0.83
MS4A1P11836 AL645939.2-201ENST00000427340 991 ntBASIC20.24■□□□□ 0.83
MS4A1P11836 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.24■□□□□ 0.83
MS4A1P11836 AP006288.1-201ENST00000446065 395 ntBASIC20.24■□□□□ 0.83
MS4A1P11836 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 AL512356.2-201ENST00000546955 174 ntBASIC20.24■□□□□ 0.83
MS4A1P11836 HNRNPUP1-201ENST00000554987 333 ntBASIC20.24■□□□□ 0.83
MS4A1P11836 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.24■□□□□ 0.83
MS4A1P11836 AC097359.3-201ENST00000603982 1210 ntBASIC20.24■□□□□ 0.83
MS4A1P11836 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC20.24■□□□□ 0.83
MS4A1P11836 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.24■□□□□ 0.83
MS4A1P11836 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
MS4A1P11836 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC20.24■□□□□ 0.83
MS4A1P11836 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
MS4A1P11836 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A1P11836 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.23■□□□□ 0.83
MS4A1P11836 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.23■□□□□ 0.83
MS4A1P11836 AP002414.2-201ENST00000591780 3365 ntBASIC20.23■□□□□ 0.83
MS4A1P11836 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A1P11836 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A1P11836 AC026748.1-201ENST00000624349 3251 ntBASIC20.23■□□□□ 0.83
MS4A1P11836 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
MS4A1P11836 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
MS4A1P11836 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A1P11836 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
MS4A1P11836 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A1P11836 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A1P11836 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
MS4A1P11836 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC20.23■□□□□ 0.83
MS4A1P11836 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A1P11836 NME2-201ENST00000393183 568 ntTSL 2 BASIC20.23■□□□□ 0.83
MS4A1P11836 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A1P11836 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
MS4A1P11836 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.23■□□□□ 0.83
MS4A1P11836 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.23■□□□□ 0.83
MS4A1P11836 AC092865.5-201ENST00000545435 363 ntBASIC20.23■□□□□ 0.83
MS4A1P11836 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A1P11836 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20.23■□□□□ 0.83
MS4A1P11836 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
MS4A1P11836 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A1P11836 AC005089.1-201ENST00000619486 2241 ntBASIC20.23■□□□□ 0.83
MS4A1P11836 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A1P11836 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A1P11836 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A1P11836 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A1P11836 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
MS4A1P11836 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC20.23■□□□□ 0.83
MS4A1P11836 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms