Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.55■□□□□ 0.24
RARAP10276 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.55■□□□□ 0.24
RARAP10276 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.55■□□□□ 0.24
RARAP10276 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RARAP10276 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RARAP10276 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 AZGP1P1-201ENST00000411909 902 ntBASIC16.55■□□□□ 0.24
RARAP10276 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
RARAP10276 DNAJB3-202ENST00000449667 1266 ntBASIC16.55■□□□□ 0.24
RARAP10276 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.55■□□□□ 0.24
RARAP10276 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.55■□□□□ 0.24
RARAP10276 MIR6080-201ENST00000617359 66 ntBASIC16.55■□□□□ 0.24
RARAP10276 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.55■□□□□ 0.24
RARAP10276 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.55■□□□□ 0.24
RARAP10276 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.55■□□□□ 0.24
RARAP10276 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.55■□□□□ 0.24
RARAP10276 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.55■□□□□ 0.24
RARAP10276 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
RARAP10276 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.55■□□□□ 0.24
RARAP10276 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.54■□□□□ 0.24
RARAP10276 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RARAP10276 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.54■□□□□ 0.24
RARAP10276 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.54■□□□□ 0.24
RARAP10276 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.54■□□□□ 0.24
RARAP10276 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 KRT8P44-201ENST00000441609 1350 ntBASIC16.54■□□□□ 0.24
RARAP10276 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RARAP10276 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.54■□□□□ 0.24
RARAP10276 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RARAP10276 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RARAP10276 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RARAP10276 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.54■□□□□ 0.24
RARAP10276 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.54■□□□□ 0.24
RARAP10276 SPDYE17-201ENST00000412399 783 ntBASIC16.54■□□□□ 0.24
RARAP10276 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.54■□□□□ 0.24
RARAP10276 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.54■□□□□ 0.24
RARAP10276 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.54■□□□□ 0.24
RARAP10276 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.54■□□□□ 0.24
RARAP10276 HNRNPUP1-201ENST00000554987 333 ntBASIC16.54■□□□□ 0.24
RARAP10276 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 AC097359.3-201ENST00000603982 1210 ntBASIC16.54■□□□□ 0.24
RARAP10276 AC023908.3-201ENST00000564211 3047 ntBASIC16.54■□□□□ 0.24
RARAP10276 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RARAP10276 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RARAP10276 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RARAP10276 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RARAP10276 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RARAP10276 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RARAP10276 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.53■□□□□ 0.24
RARAP10276 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.53■□□□□ 0.24
RARAP10276 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RARAP10276 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.53■□□□□ 0.24
RARAP10276 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RARAP10276 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.53■□□□□ 0.24
RARAP10276 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.53■□□□□ 0.24
RARAP10276 AL512356.2-201ENST00000546955 174 ntBASIC16.53■□□□□ 0.24
RARAP10276 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
RARAP10276 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.53■□□□□ 0.24
RARAP10276 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms