Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINGO3P0C6S8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
LINGO3P0C6S8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 GGT3P-204ENST00000453783 1664 ntBASIC15.33■□□□□ 0.04
LINGO3P0C6S8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 CXCL1P1-201ENST00000502804 216 ntBASIC15.33■□□□□ 0.04
LINGO3P0C6S8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 AC087641.1-201ENST00000557561 1021 ntBASIC15.33■□□□□ 0.04
LINGO3P0C6S8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 ACTL9-202ENST00000612068 1252 ntBASIC15.33■□□□□ 0.04
LINGO3P0C6S8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 REXO1L8P-201ENST00000604378 1897 ntBASIC15.33■□□□□ 0.04
LINGO3P0C6S8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.33■□□□□ 0.04
LINGO3P0C6S8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 SLC22A20-204ENST00000530038 1673 ntBASIC15.32■□□□□ 0.04
LINGO3P0C6S8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 AL022342.1-201ENST00000400363 863 ntBASIC15.32■□□□□ 0.04
LINGO3P0C6S8 HCG4-201ENST00000418983 998 ntBASIC15.32■□□□□ 0.04
LINGO3P0C6S8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 CYP2A7P1-201ENST00000595391 815 ntBASIC15.32■□□□□ 0.04
LINGO3P0C6S8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 KRT8P39-201ENST00000396270 1433 ntBASIC15.32■□□□□ 0.04
LINGO3P0C6S8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.32■□□□□ 0.04
LINGO3P0C6S8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms