Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BEST1O76090 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.45■□□□□ 0.22
BEST1O76090 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
BEST1O76090 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BEST1O76090 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
BEST1O76090 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.44■□□□□ 0.22
BEST1O76090 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
BEST1O76090 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
BEST1O76090 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
BEST1O76090 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
BEST1O76090 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.44■□□□□ 0.22
BEST1O76090 AL442647.2-201ENST00000429864 857 ntBASIC16.44■□□□□ 0.22
BEST1O76090 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.44■□□□□ 0.22
BEST1O76090 RN7SL752P-201ENST00000463779 287 ntBASIC16.44■□□□□ 0.22
BEST1O76090 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.44■□□□□ 0.22
BEST1O76090 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.44■□□□□ 0.22
BEST1O76090 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.44■□□□□ 0.22
BEST1O76090 IGHV3-72-202ENST00000621503 303 ntBASIC16.44■□□□□ 0.22
BEST1O76090 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.44■□□□□ 0.22
BEST1O76090 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.44■□□□□ 0.22
BEST1O76090 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
BEST1O76090 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.44■□□□□ 0.22
BEST1O76090 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.44■□□□□ 0.22
BEST1O76090 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 CU639417.3-201ENST00000624240 1404 ntBASIC16.44■□□□□ 0.22
BEST1O76090 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.44■□□□□ 0.22
BEST1O76090 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.44■□□□□ 0.22
BEST1O76090 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.44■□□□□ 0.22
BEST1O76090 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST1O76090 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 CROCCP1-201ENST00000426910 5675 ntBASIC16.43■□□□□ 0.22
BEST1O76090 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.43■□□□□ 0.22
BEST1O76090 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.43■□□□□ 0.22
BEST1O76090 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.43■□□□□ 0.22
BEST1O76090 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.43■□□□□ 0.22
BEST1O76090 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.43■□□□□ 0.22
BEST1O76090 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.43■□□□□ 0.22
BEST1O76090 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.43■□□□□ 0.22
BEST1O76090 RN7SL837P-201ENST00000463010 287 ntBASIC16.43■□□□□ 0.22
BEST1O76090 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.43■□□□□ 0.22
BEST1O76090 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.43■□□□□ 0.22
BEST1O76090 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.43■□□□□ 0.22
BEST1O76090 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
BEST1O76090 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
BEST1O76090 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
BEST1O76090 RPSAP52-203ENST00000622976 1023 ntBASIC16.43■□□□□ 0.22
BEST1O76090 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.43■□□□□ 0.22
BEST1O76090 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.43■□□□□ 0.22
BEST1O76090 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.43■□□□□ 0.22
BEST1O76090 DRD5P1-201ENST00000456605 1438 ntBASIC16.43■□□□□ 0.22
BEST1O76090 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.43■□□□□ 0.22
BEST1O76090 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms