Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
DLX3O60479 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
DLX3O60479 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.46■□□□□ 0.07
DLX3O60479 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.46■□□□□ 0.07
DLX3O60479 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
DLX3O60479 YBX2P1-201ENST00000394192 760 ntBASIC15.46■□□□□ 0.07
DLX3O60479 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
DLX3O60479 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.46■□□□□ 0.07
DLX3O60479 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
DLX3O60479 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
DLX3O60479 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.46■□□□□ 0.07
DLX3O60479 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.46■□□□□ 0.07
DLX3O60479 RARRES2P9-201ENST00000565168 469 ntBASIC15.46■□□□□ 0.07
DLX3O60479 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
DLX3O60479 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
DLX3O60479 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
DLX3O60479 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.46■□□□□ 0.07
DLX3O60479 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
DLX3O60479 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.46■□□□□ 0.07
DLX3O60479 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
DLX3O60479 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
DLX3O60479 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
DLX3O60479 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
DLX3O60479 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
DLX3O60479 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
DLX3O60479 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
DLX3O60479 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.46■□□□□ 0.06
DLX3O60479 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
DLX3O60479 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.45■□□□□ 0.06
DLX3O60479 AC007292.2-201ENST00000593524 1812 ntBASIC15.45■□□□□ 0.06
DLX3O60479 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.45■□□□□ 0.06
DLX3O60479 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.45■□□□□ 0.06
DLX3O60479 AC063926.3-201ENST00000624734 5658 ntBASIC15.45■□□□□ 0.06
DLX3O60479 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
DLX3O60479 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
DLX3O60479 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.45■□□□□ 0.06
DLX3O60479 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 AC067930.6-201ENST00000623257 4947 ntBASIC15.45■□□□□ 0.06
DLX3O60479 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.45■□□□□ 0.06
DLX3O60479 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.45■□□□□ 0.06
DLX3O60479 AL592309.1-201ENST00000443127 649 ntBASIC15.45■□□□□ 0.06
DLX3O60479 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.45■□□□□ 0.06
DLX3O60479 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.45■□□□□ 0.06
DLX3O60479 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.45■□□□□ 0.06
DLX3O60479 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
DLX3O60479 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.45■□□□□ 0.06
DLX3O60479 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.45■□□□□ 0.06
DLX3O60479 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
DLX3O60479 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
DLX3O60479 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DLX3O60479 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
DLX3O60479 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
DLX3O60479 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.44■□□□□ 0.06
DLX3O60479 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 FGD5P1-202ENST00000614866 2498 ntBASIC15.44■□□□□ 0.06
DLX3O60479 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.44■□□□□ 0.06
DLX3O60479 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
DLX3O60479 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
DLX3O60479 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
DLX3O60479 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
DLX3O60479 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
DLX3O60479 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
DLX3O60479 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
DLX3O60479 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
DLX3O60479 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DLX3O60479 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.44■□□□□ 0.06
DLX3O60479 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.44■□□□□ 0.06
DLX3O60479 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.44■□□□□ 0.06
DLX3O60479 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.44■□□□□ 0.06
DLX3O60479 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.44■□□□□ 0.06
DLX3O60479 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.44■□□□□ 0.06
DLX3O60479 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms