Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 NORAD-201ENST00000565493 5339 ntBASIC14.09□□□□□ -0.15
CXCL13O43927 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCL13O43927 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
CXCL13O43927 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CXCL13O43927 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.09□□□□□ -0.15
CXCL13O43927 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.09□□□□□ -0.15
CXCL13O43927 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.09□□□□□ -0.15
CXCL13O43927 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CXCL13O43927 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 AC087499.6-201ENST00000411576 835 ntBASIC14.09□□□□□ -0.15
CXCL13O43927 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CXCL13O43927 TOMM22P5-201ENST00000416399 439 ntBASIC14.09□□□□□ -0.15
CXCL13O43927 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.09□□□□□ -0.15
CXCL13O43927 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.09□□□□□ -0.15
CXCL13O43927 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.09□□□□□ -0.15
CXCL13O43927 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.09□□□□□ -0.15
CXCL13O43927 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCL13O43927 API5-211ENST00000534695 560 ntTSL 5 BASIC14.09□□□□□ -0.15
CXCL13O43927 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCL13O43927 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.09□□□□□ -0.15
CXCL13O43927 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.09□□□□□ -0.15
CXCL13O43927 AL158212.4-201ENST00000624062 1286 ntBASIC14.09□□□□□ -0.15
CXCL13O43927 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CXCL13O43927 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCL13O43927 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CXCL13O43927 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.09□□□□□ -0.15
CXCL13O43927 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CXCL13O43927 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL13O43927 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CXCL13O43927 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.08□□□□□ -0.15
CXCL13O43927 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCL13O43927 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCL13O43927 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CXCL13O43927 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.08□□□□□ -0.15
CXCL13O43927 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 AC092127.1-201ENST00000567093 3455 ntBASIC14.08□□□□□ -0.16
CXCL13O43927 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CXCL13O43927 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCL13O43927 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CXCL13O43927 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCL13O43927 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.08□□□□□ -0.16
CXCL13O43927 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCL13O43927 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
CXCL13O43927 RARRES2P5-201ENST00000564013 466 ntBASIC14.08□□□□□ -0.16
CXCL13O43927 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCL13O43927 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCL13O43927 CHCHD2P3-201ENST00000603038 451 ntBASIC14.08□□□□□ -0.16
CXCL13O43927 AL662799.1-202ENST00000614205 422 ntBASIC14.08□□□□□ -0.16
CXCL13O43927 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CXCL13O43927 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CXCL13O43927 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CXCL13O43927 AL139384.1-201ENST00000612143 3047 ntBASIC14.08□□□□□ -0.16
CXCL13O43927 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCL13O43927 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
CXCL13O43927 AL391825.1-201ENST00000457671 1364 ntBASIC14.08□□□□□ -0.16
CXCL13O43927 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CXCL13O43927 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCL13O43927 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.08□□□□□ -0.16
CXCL13O43927 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CXCL13O43927 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL13O43927 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.07□□□□□ -0.16
CXCL13O43927 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL13O43927 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL13O43927 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL13O43927 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL13O43927 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms