Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.47■□□□□ 0.07
ITM2AO43736 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.47■□□□□ 0.07
ITM2AO43736 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.47■□□□□ 0.07
ITM2AO43736 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.47■□□□□ 0.07
ITM2AO43736 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
ITM2AO43736 KRT8P37-201ENST00000451609 1420 ntBASIC15.47■□□□□ 0.07
ITM2AO43736 AC105233.2-201ENST00000523697 349 ntBASIC15.47■□□□□ 0.07
ITM2AO43736 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.47■□□□□ 0.07
ITM2AO43736 AF228730.5-201ENST00000530288 346 ntBASIC15.47■□□□□ 0.07
ITM2AO43736 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.47■□□□□ 0.07
ITM2AO43736 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.47■□□□□ 0.07
ITM2AO43736 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.47■□□□□ 0.07
ITM2AO43736 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 AC068137.2-201ENST00000605408 478 ntBASIC15.47■□□□□ 0.07
ITM2AO43736 Z83851.2-201ENST00000609564 659 ntBASIC15.47■□□□□ 0.07
ITM2AO43736 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.47■□□□□ 0.07
ITM2AO43736 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
ITM2AO43736 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ITM2AO43736 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.47■□□□□ 0.07
ITM2AO43736 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.47■□□□□ 0.07
ITM2AO43736 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
ITM2AO43736 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.47■□□□□ 0.07
ITM2AO43736 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ITM2AO43736 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.47■□□□□ 0.07
ITM2AO43736 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.47■□□□□ 0.07
ITM2AO43736 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ITM2AO43736 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ITM2AO43736 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ITM2AO43736 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
ITM2AO43736 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ITM2AO43736 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.46■□□□□ 0.07
ITM2AO43736 CYP4F24P-201ENST00000586049 1580 ntBASIC15.46■□□□□ 0.07
ITM2AO43736 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ITM2AO43736 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ITM2AO43736 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.46■□□□□ 0.07
ITM2AO43736 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ITM2AO43736 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ITM2AO43736 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ITM2AO43736 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ITM2AO43736 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.46■□□□□ 0.07
ITM2AO43736 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.46■□□□□ 0.07
ITM2AO43736 AC079776.4-201ENST00000511039 504 ntBASIC15.46■□□□□ 0.07
ITM2AO43736 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.46■□□□□ 0.07
ITM2AO43736 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.46■□□□□ 0.07
ITM2AO43736 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.46■□□□□ 0.07
ITM2AO43736 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.46■□□□□ 0.07
ITM2AO43736 HNRNPUP1-201ENST00000554987 333 ntBASIC15.46■□□□□ 0.07
ITM2AO43736 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.46■□□□□ 0.07
ITM2AO43736 RN7SL510P-201ENST00000581311 263 ntBASIC15.46■□□□□ 0.07
ITM2AO43736 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.46■□□□□ 0.07
ITM2AO43736 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ITM2AO43736 AC064836.3-201ENST00000607928 673 ntBASIC15.46■□□□□ 0.07
ITM2AO43736 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.46■□□□□ 0.07
ITM2AO43736 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ITM2AO43736 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
ITM2AO43736 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ITM2AO43736 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ITM2AO43736 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
ITM2AO43736 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.46■□□□□ 0.07
ITM2AO43736 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.06
ITM2AO43736 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.46■□□□□ 0.06
ITM2AO43736 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.46■□□□□ 0.06
ITM2AO43736 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ITM2AO43736 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.45■□□□□ 0.06
ITM2AO43736 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
ITM2AO43736 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.45■□□□□ 0.06
ITM2AO43736 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.45■□□□□ 0.06
ITM2AO43736 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.45■□□□□ 0.06
ITM2AO43736 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ITM2AO43736 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ITM2AO43736 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ITM2AO43736 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ITM2AO43736 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.45■□□□□ 0.06
ITM2AO43736 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ITM2AO43736 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ITM2AO43736 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ITM2AO43736 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ITM2AO43736 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ITM2AO43736 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ITM2AO43736 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ITM2AO43736 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ITM2AO43736 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ITM2AO43736 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms