Protein–RNA interactions for Protein: O15467

CCL16, C-C motif chemokine 16, humanhuman

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16O15467 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCL16O15467 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL16O15467 MIR326-201ENST00000362220 95 ntBASIC16.29■□□□□ 0.2
CCL16O15467 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL16O15467 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCL16O15467 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL16O15467 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL16O15467 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.29■□□□□ 0.2
CCL16O15467 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL16O15467 MIR3615-201ENST00000581999 87 ntBASIC16.29■□□□□ 0.2
CCL16O15467 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL16O15467 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.29■□□□□ 0.2
CCL16O15467 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.29■□□□□ 0.2
CCL16O15467 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL16O15467 BX539320.1-201ENST00000623759 877 ntBASIC16.29■□□□□ 0.2
CCL16O15467 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCL16O15467 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL16O15467 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCL16O15467 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CCL16O15467 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL16O15467 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL16O15467 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL16O15467 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL16O15467 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL16O15467 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL16O15467 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL16O15467 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL16O15467 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL16O15467 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCL16O15467 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCL16O15467 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL16O15467 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCL16O15467 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
CCL16O15467 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL16O15467 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CCL16O15467 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL16O15467 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCL16O15467 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCL16O15467 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL16O15467 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL16O15467 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.28■□□□□ 0.2
CCL16O15467 AL590640.2-201ENST00000457038 527 ntBASIC16.28■□□□□ 0.2
CCL16O15467 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCL16O15467 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL16O15467 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CCL16O15467 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.28■□□□□ 0.2
CCL16O15467 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.28■□□□□ 0.2
CCL16O15467 AC103810.3-201ENST00000583567 96 ntBASIC16.28■□□□□ 0.2
CCL16O15467 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.28■□□□□ 0.2
CCL16O15467 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL16O15467 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 AL118558.3-201ENST00000607414 1079 ntBASIC16.28■□□□□ 0.2
CCL16O15467 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL16O15467 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.28■□□□□ 0.2
CCL16O15467 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CCL16O15467 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCL16O15467 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL16O15467 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL16O15467 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL16O15467 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 PCDH8P1-201ENST00000428983 2773 ntBASIC16.27■□□□□ 0.2
CCL16O15467 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.27■□□□□ 0.2
CCL16O15467 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCL16O15467 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL16O15467 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CCL16O15467 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL16O15467 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms