Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
FOXN1O15353 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.76■□□□□ 0.59
FOXN1O15353 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXN1O15353 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.75■□□□□ 0.59
FOXN1O15353 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXN1O15353 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 SERF2-206ENST00000409291 807 ntTSL 3 BASIC18.75■□□□□ 0.59
FOXN1O15353 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.75■□□□□ 0.59
FOXN1O15353 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.75■□□□□ 0.59
FOXN1O15353 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.75■□□□□ 0.59
FOXN1O15353 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.75■□□□□ 0.59
FOXN1O15353 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.75■□□□□ 0.59
FOXN1O15353 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.75■□□□□ 0.59
FOXN1O15353 IQSEC3P1-201ENST00000538799 536 ntBASIC18.75■□□□□ 0.59
FOXN1O15353 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.75■□□□□ 0.59
FOXN1O15353 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.75■□□□□ 0.59
FOXN1O15353 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
FOXN1O15353 PKD1P1-201ENST00000458669 6805 ntBASIC18.75■□□□□ 0.59
FOXN1O15353 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXN1O15353 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN1O15353 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
FOXN1O15353 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXN1O15353 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXN1O15353 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
FOXN1O15353 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
FOXN1O15353 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXN1O15353 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXN1O15353 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 MTHFR-217ENST00000641820 1569 ntBASIC18.74■□□□□ 0.59
FOXN1O15353 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXN1O15353 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXN1O15353 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.74■□□□□ 0.59
FOXN1O15353 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
FOXN1O15353 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 SOCS2P1-201ENST00000417727 557 ntBASIC18.74■□□□□ 0.59
FOXN1O15353 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.74■□□□□ 0.59
FOXN1O15353 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.74■□□□□ 0.59
FOXN1O15353 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
FOXN1O15353 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
FOXN1O15353 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
FOXN1O15353 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN1O15353 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXN1O15353 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 AL162727.3-201ENST00000635661 2787 ntBASIC18.73■□□□□ 0.59
FOXN1O15353 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.73■□□□□ 0.59
FOXN1O15353 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXN1O15353 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.73■□□□□ 0.59
FOXN1O15353 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms