Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.48□□□□□ -0.25
SDCBPO00560 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.48□□□□□ -0.25
SDCBPO00560 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SDCBPO00560 FAM197Y3-203ENST00000618346 717 ntBASIC13.48□□□□□ -0.25
SDCBPO00560 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.48□□□□□ -0.25
SDCBPO00560 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SDCBPO00560 CICP23-201ENST00000605013 2741 ntBASIC13.48□□□□□ -0.25
SDCBPO00560 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SDCBPO00560 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SDCBPO00560 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.48□□□□□ -0.25
SDCBPO00560 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SDCBPO00560 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SDCBPO00560 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.48□□□□□ -0.25
SDCBPO00560 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SDCBPO00560 ST20-AS1-201ENST00000560255 4223 ntBASIC13.48□□□□□ -0.25
SDCBPO00560 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.48□□□□□ -0.25
SDCBPO00560 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.48□□□□□ -0.25
SDCBPO00560 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SDCBPO00560 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SDCBPO00560 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SDCBPO00560 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SDCBPO00560 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.48□□□□□ -0.25
SDCBPO00560 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.48□□□□□ -0.25
SDCBPO00560 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SDCBPO00560 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.48□□□□□ -0.25
SDCBPO00560 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SDCBPO00560 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SDCBPO00560 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SDCBPO00560 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.47□□□□□ -0.25
SDCBPO00560 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.47□□□□□ -0.25
SDCBPO00560 PMS2P7-201ENST00000506558 1336 ntBASIC13.47□□□□□ -0.25
SDCBPO00560 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SDCBPO00560 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 MIR940-201ENST00000401276 94 ntBASIC13.47□□□□□ -0.25
SDCBPO00560 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.47□□□□□ -0.25
SDCBPO00560 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.47□□□□□ -0.25
SDCBPO00560 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SDCBPO00560 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.47□□□□□ -0.25
SDCBPO00560 AL365330.1-201ENST00000607459 531 ntBASIC13.47□□□□□ -0.25
SDCBPO00560 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
SDCBPO00560 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.47□□□□□ -0.25
SDCBPO00560 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
SDCBPO00560 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.47□□□□□ -0.25
SDCBPO00560 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 AC073439.1-201ENST00000624121 1774 ntBASIC13.47□□□□□ -0.25
SDCBPO00560 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SDCBPO00560 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SDCBPO00560 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.47□□□□□ -0.25
SDCBPO00560 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SDCBPO00560 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.46□□□□□ -0.25
SDCBPO00560 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SDCBPO00560 AC139749.1-202ENST00000617529 3139 ntBASIC13.46□□□□□ -0.25
SDCBPO00560 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SDCBPO00560 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SDCBPO00560 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SDCBPO00560 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.46□□□□□ -0.25
SDCBPO00560 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.46□□□□□ -0.25
SDCBPO00560 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
SDCBPO00560 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.46□□□□□ -0.25
SDCBPO00560 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
SDCBPO00560 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SDCBPO00560 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SDCBPO00560 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SDCBPO00560 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.46□□□□□ -0.25
SDCBPO00560 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SDCBPO00560 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.46□□□□□ -0.25
SDCBPO00560 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.46□□□□□ -0.25
SDCBPO00560 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SDCBPO00560 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SDCBPO00560 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SDCBPO00560 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SDCBPO00560 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.46□□□□□ -0.25
SDCBPO00560 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.46□□□□□ -0.25
SDCBPO00560 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SDCBPO00560 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SDCBPO00560 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SDCBPO00560 AC245100.5-201ENST00000452108 331 ntBASIC13.46□□□□□ -0.25
SDCBPO00560 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
SDCBPO00560 PRYP6-201ENST00000514804 343 ntBASIC13.46□□□□□ -0.25
SDCBPO00560 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.46□□□□□ -0.25
SDCBPO00560 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.46□□□□□ -0.25
SDCBPO00560 AP002472.1-201ENST00000577490 586 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms