Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 FO538757.1-201ENST00000623083 1397 ntBASIC13.74□□□□□ -0.21
SHISA3A0PJX4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 AC113367.3-201ENST00000508316 1912 ntBASIC13.73□□□□□ -0.21
SHISA3A0PJX4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 PRSS29P-201ENST00000440800 595 ntBASIC13.73□□□□□ -0.21
SHISA3A0PJX4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 AL450472.2-201ENST00000603663 1156 ntBASIC13.73□□□□□ -0.21
SHISA3A0PJX4 AC097359.3-201ENST00000603982 1210 ntBASIC13.73□□□□□ -0.21
SHISA3A0PJX4 AC117500.6-201ENST00000624871 588 ntBASIC13.73□□□□□ -0.21
SHISA3A0PJX4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHISA3A0PJX4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA3A0PJX4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA3A0PJX4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SHISA3A0PJX4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA3A0PJX4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.72□□□□□ -0.21
SHISA3A0PJX4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA3A0PJX4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms