Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
TMEM129A0AVI4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TMEM129A0AVI4 AL359258.3-201ENST00000622910 2331 ntBASIC14.3□□□□□ -0.12
TMEM129A0AVI4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
TMEM129A0AVI4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM129A0AVI4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM129A0AVI4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM129A0AVI4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM129A0AVI4 FGD5P1-202ENST00000614866 2498 ntBASIC14.3□□□□□ -0.12
TMEM129A0AVI4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TMEM129A0AVI4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 PMS2P2-201ENST00000425039 1128 ntBASIC14.29□□□□□ -0.12
TMEM129A0AVI4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 TIMM8BP1-201ENST00000452384 211 ntBASIC14.29□□□□□ -0.12
TMEM129A0AVI4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 RARRES2P8-201ENST00000566335 367 ntBASIC14.29□□□□□ -0.12
TMEM129A0AVI4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 AC004835.2-201ENST00000603762 682 ntBASIC14.29□□□□□ -0.12
TMEM129A0AVI4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 AKAP8P1-201ENST00000434743 1349 ntBASIC14.29□□□□□ -0.12
TMEM129A0AVI4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM129A0AVI4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 SPDYE11-202ENST00000450699 704 ntBASIC14.28□□□□□ -0.12
TMEM129A0AVI4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 AL135744.1-201ENST00000565098 629 ntBASIC14.28□□□□□ -0.12
TMEM129A0AVI4 SPDYE9P-201ENST00000570642 692 ntBASIC14.28□□□□□ -0.12
TMEM129A0AVI4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 SPDYE10P-202ENST00000612005 668 ntBASIC14.28□□□□□ -0.12
TMEM129A0AVI4 SPDYE8P-202ENST00000612377 668 ntBASIC14.28□□□□□ -0.12
TMEM129A0AVI4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms