Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC126365.1-201ENST00000578585 1514 ntBASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 C8orf49-201ENST00000525043 1968 ntBASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 REXO1L1P-202ENST00000608646 1974 ntBASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 AL691432.1-201ENST00000596308 1422 ntBASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 AC098831.1-202ENST00000438821 336 ntBASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 HCG4B-203ENST00000450128 991 ntBASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 AC096734.2-201ENST00000562054 433 ntBASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV5A0A0B4J249 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 AC007191.1-201ENST00000623179 2995 ntBASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 RHOQP3-201ENST00000437982 621 ntBASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 AC009947.1-201ENST00000444350 727 ntBASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 UNC93B6-202ENST00000528242 690 ntBASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 AC243562.2-201ENST00000561247 970 ntBASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 AC023141.13-201ENST00000604991 943 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms