Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.56■■□□□ 1.68
PCDHA11Q9Y5I1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.56■■□□□ 1.68
PCDHA11Q9Y5I1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHA11Q9Y5I1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHA11Q9Y5I1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.55■■□□□ 1.68
PCDHA11Q9Y5I1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA11Q9Y5I1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.55■■□□□ 1.68
PCDHA11Q9Y5I1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA11Q9Y5I1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
PCDHA11Q9Y5I1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
PCDHA11Q9Y5I1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
PCDHA11Q9Y5I1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA11Q9Y5I1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA11Q9Y5I1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
PCDHA11Q9Y5I1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
PCDHA11Q9Y5I1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA11Q9Y5I1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
PCDHA11Q9Y5I1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDHA11Q9Y5I1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA11Q9Y5I1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA11Q9Y5I1 AC105265.2-201ENST00000467189 838 ntBASIC25.53■■□□□ 1.68
PCDHA11Q9Y5I1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.53■■□□□ 1.68
PCDHA11Q9Y5I1 AC024257.2-201ENST00000549699 147 ntBASIC25.53■■□□□ 1.68
PCDHA11Q9Y5I1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA11Q9Y5I1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
PCDHA11Q9Y5I1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDHA11Q9Y5I1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.52■■□□□ 1.68
PCDHA11Q9Y5I1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.52■■□□□ 1.68
PCDHA11Q9Y5I1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.52■■□□□ 1.68
PCDHA11Q9Y5I1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
PCDHA11Q9Y5I1 MIR6722-201ENST00000617286 78 ntBASIC25.52■■□□□ 1.68
PCDHA11Q9Y5I1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA11Q9Y5I1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA11Q9Y5I1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDHA11Q9Y5I1 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.51■■□□□ 1.67
PCDHA11Q9Y5I1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.51■■□□□ 1.67
PCDHA11Q9Y5I1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PCDHA11Q9Y5I1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA11Q9Y5I1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
PCDHA11Q9Y5I1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
PCDHA11Q9Y5I1 SRD5A1P1-201ENST00000442297 786 ntBASIC25.5■■□□□ 1.67
PCDHA11Q9Y5I1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.5■■□□□ 1.67
PCDHA11Q9Y5I1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.5■■□□□ 1.67
PCDHA11Q9Y5I1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA11Q9Y5I1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA11Q9Y5I1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.49■■□□□ 1.67
PCDHA11Q9Y5I1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA11Q9Y5I1 AC142472.1-201ENST00000612013 1741 ntBASIC25.49■■□□□ 1.67
PCDHA11Q9Y5I1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA11Q9Y5I1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDHA11Q9Y5I1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA11Q9Y5I1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHA11Q9Y5I1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.49■■□□□ 1.67
PCDHA11Q9Y5I1 MIR6821-201ENST00000617625 74 ntBASIC25.49■■□□□ 1.67
PCDHA11Q9Y5I1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
PCDHA11Q9Y5I1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDHA11Q9Y5I1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
PCDHA11Q9Y5I1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDHA11Q9Y5I1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA11Q9Y5I1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA11Q9Y5I1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.48■■□□□ 1.67
PCDHA11Q9Y5I1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.48■■□□□ 1.67
PCDHA11Q9Y5I1 AL136967.2-201ENST00000623968 743 ntBASIC25.48■■□□□ 1.67
PCDHA11Q9Y5I1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA11Q9Y5I1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
PCDHA11Q9Y5I1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA11Q9Y5I1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA11Q9Y5I1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA11Q9Y5I1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA11Q9Y5I1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHA11Q9Y5I1 SNX5-217ENST00000606557 1087 ntBASIC25.47■■□□□ 1.67
PCDHA11Q9Y5I1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA11Q9Y5I1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA11Q9Y5I1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA11Q9Y5I1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDHA11Q9Y5I1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA11Q9Y5I1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
PCDHA11Q9Y5I1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDHA11Q9Y5I1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA11Q9Y5I1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
PCDHA11Q9Y5I1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDHA11Q9Y5I1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
PCDHA11Q9Y5I1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA11Q9Y5I1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
PCDHA11Q9Y5I1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA11Q9Y5I1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA11Q9Y5I1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA11Q9Y5I1 AF213884.3-201ENST00000563833 479 ntBASIC25.44■■□□□ 1.66
PCDHA11Q9Y5I1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.44■■□□□ 1.66
PCDHA11Q9Y5I1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA11Q9Y5I1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA11Q9Y5I1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
PCDHA11Q9Y5I1 AC097381.1-201ENST00000429019 1296 ntBASIC25.43■■□□□ 1.66
PCDHA11Q9Y5I1 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.43■■□□□ 1.66
PCDHA11Q9Y5I1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA11Q9Y5I1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA11Q9Y5I1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA11Q9Y5I1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDHA11Q9Y5I1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA11Q9Y5I1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms