Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
PCDHGA9Q9Y5G4 AC145676.1-201ENST00000514988 2004 ntBASIC21.85■■□□□ 1.09
PCDHGA9Q9Y5G4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGA9Q9Y5G4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA9Q9Y5G4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGA9Q9Y5G4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA9Q9Y5G4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHGA9Q9Y5G4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHGA9Q9Y5G4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.84■■□□□ 1.09
PCDHGA9Q9Y5G4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHGA9Q9Y5G4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGA9Q9Y5G4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA9Q9Y5G4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGA9Q9Y5G4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGA9Q9Y5G4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA9Q9Y5G4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.83■■□□□ 1.09
PCDHGA9Q9Y5G4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA9Q9Y5G4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PCDHGA9Q9Y5G4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.83■■□□□ 1.09
PCDHGA9Q9Y5G4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.83■■□□□ 1.08
PCDHGA9Q9Y5G4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGA9Q9Y5G4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.83■■□□□ 1.08
PCDHGA9Q9Y5G4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGA9Q9Y5G4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHGA9Q9Y5G4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PCDHGA9Q9Y5G4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHGA9Q9Y5G4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA9Q9Y5G4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA9Q9Y5G4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA9Q9Y5G4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA9Q9Y5G4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA9Q9Y5G4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA9Q9Y5G4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA9Q9Y5G4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA9Q9Y5G4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDHGA9Q9Y5G4 AC110285.6-201ENST00000617652 491 ntBASIC21.81■■□□□ 1.08
PCDHGA9Q9Y5G4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA9Q9Y5G4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PCDHGA9Q9Y5G4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA9Q9Y5G4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA9Q9Y5G4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.8■■□□□ 1.08
PCDHGA9Q9Y5G4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA9Q9Y5G4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA9Q9Y5G4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGA9Q9Y5G4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHGA9Q9Y5G4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGA9Q9Y5G4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA9Q9Y5G4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA9Q9Y5G4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA9Q9Y5G4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA9Q9Y5G4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHGA9Q9Y5G4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHGA9Q9Y5G4 AC133561.4-201ENST00000566112 224 ntBASIC21.78■■□□□ 1.08
PCDHGA9Q9Y5G4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHGA9Q9Y5G4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA9Q9Y5G4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA9Q9Y5G4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHGA9Q9Y5G4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA9Q9Y5G4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA9Q9Y5G4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA9Q9Y5G4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PCDHGA9Q9Y5G4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA9Q9Y5G4 AC096631.2-201ENST00000436136 790 ntBASIC21.76■■□□□ 1.07
PCDHGA9Q9Y5G4 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGA9Q9Y5G4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGA9Q9Y5G4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGA9Q9Y5G4 MIR4466-201ENST00000606121 54 ntBASIC21.76■■□□□ 1.07
PCDHGA9Q9Y5G4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHGA9Q9Y5G4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PCDHGA9Q9Y5G4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
PCDHGA9Q9Y5G4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PCDHGA9Q9Y5G4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDHGA9Q9Y5G4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA9Q9Y5G4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
PCDHGA9Q9Y5G4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA9Q9Y5G4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.75■■□□□ 1.07
PCDHGA9Q9Y5G4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGA9Q9Y5G4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGA9Q9Y5G4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGA9Q9Y5G4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGA9Q9Y5G4 AC005837.3-201ENST00000612163 286 ntBASIC21.75■■□□□ 1.07
PCDHGA9Q9Y5G4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA9Q9Y5G4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGA9Q9Y5G4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDHGA9Q9Y5G4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGA9Q9Y5G4 AL512631.2-201ENST00000604634 923 ntBASIC21.74■■□□□ 1.07
PCDHGA9Q9Y5G4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA9Q9Y5G4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA9Q9Y5G4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA9Q9Y5G4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA9Q9Y5G4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA9Q9Y5G4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA9Q9Y5G4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA9Q9Y5G4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHGA9Q9Y5G4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA9Q9Y5G4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA9Q9Y5G4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA9Q9Y5G4 AF131216.4-201ENST00000638924 1588 ntBASIC21.73■■□□□ 1.07
PCDHGA9Q9Y5G4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA9Q9Y5G4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms