Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGB3Q9Y5G1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGB3Q9Y5G1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGB3Q9Y5G1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGB3Q9Y5G1 SLC6A10P-202ENST00000431994 2058 ntBASIC22.02■■□□□ 1.12
PCDHGB3Q9Y5G1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PCDHGB3Q9Y5G1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
PCDHGB3Q9Y5G1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PCDHGB3Q9Y5G1 AC018755.3-202ENST00000596210 929 ntBASIC22.02■■□□□ 1.12
PCDHGB3Q9Y5G1 AC074183.2-201ENST00000623112 922 ntBASIC22.02■■□□□ 1.12
PCDHGB3Q9Y5G1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGB3Q9Y5G1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGB3Q9Y5G1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGB3Q9Y5G1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGB3Q9Y5G1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.11
PCDHGB3Q9Y5G1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHGB3Q9Y5G1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDHGB3Q9Y5G1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHGB3Q9Y5G1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGB3Q9Y5G1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGB3Q9Y5G1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PCDHGB3Q9Y5G1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGB3Q9Y5G1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGB3Q9Y5G1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
PCDHGB3Q9Y5G1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
PCDHGB3Q9Y5G1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB3Q9Y5G1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB3Q9Y5G1 LINC00543-201ENST00000567234 1845 ntBASIC21.99■■□□□ 1.11
PCDHGB3Q9Y5G1 DUX4L9-201ENST00000449051 1259 ntBASIC21.99■■□□□ 1.11
PCDHGB3Q9Y5G1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.99■■□□□ 1.11
PCDHGB3Q9Y5G1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGB3Q9Y5G1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGB3Q9Y5G1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGB3Q9Y5G1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGB3Q9Y5G1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGB3Q9Y5G1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
PCDHGB3Q9Y5G1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGB3Q9Y5G1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB3Q9Y5G1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHGB3Q9Y5G1 MIR6765-201ENST00000614092 87 ntBASIC21.97■■□□□ 1.11
PCDHGB3Q9Y5G1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB3Q9Y5G1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB3Q9Y5G1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.97■■□□□ 1.11
PCDHGB3Q9Y5G1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB3Q9Y5G1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB3Q9Y5G1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB3Q9Y5G1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB3Q9Y5G1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHGB3Q9Y5G1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB3Q9Y5G1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB3Q9Y5G1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHGB3Q9Y5G1 DUX4L18-201ENST00000553347 1267 ntBASIC21.96■■□□□ 1.11
PCDHGB3Q9Y5G1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB3Q9Y5G1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB3Q9Y5G1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHGB3Q9Y5G1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB3Q9Y5G1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB3Q9Y5G1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
PCDHGB3Q9Y5G1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHGB3Q9Y5G1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGB3Q9Y5G1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGB3Q9Y5G1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHGB3Q9Y5G1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
PCDHGB3Q9Y5G1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PCDHGB3Q9Y5G1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGB3Q9Y5G1 AC141586.4-201ENST00000624558 1573 ntBASIC21.95■■□□□ 1.1
PCDHGB3Q9Y5G1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGB3Q9Y5G1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGB3Q9Y5G1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGB3Q9Y5G1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHGB3Q9Y5G1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGB3Q9Y5G1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGB3Q9Y5G1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHGB3Q9Y5G1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGB3Q9Y5G1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
PCDHGB3Q9Y5G1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGB3Q9Y5G1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB3Q9Y5G1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB3Q9Y5G1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB3Q9Y5G1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB3Q9Y5G1 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHGB3Q9Y5G1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB3Q9Y5G1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB3Q9Y5G1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHGB3Q9Y5G1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHGB3Q9Y5G1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB3Q9Y5G1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGB3Q9Y5G1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGB3Q9Y5G1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGB3Q9Y5G1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHGB3Q9Y5G1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHGB3Q9Y5G1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHGB3Q9Y5G1 SPCS2P3-201ENST00000500401 656 ntBASIC21.92■■□□□ 1.1
PCDHGB3Q9Y5G1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHGB3Q9Y5G1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PCDHGB3Q9Y5G1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGB3Q9Y5G1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHGB3Q9Y5G1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGB3Q9Y5G1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHGB3Q9Y5G1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms