Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB11Q9Y5F2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB11Q9Y5F2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB11Q9Y5F2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB11Q9Y5F2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB11Q9Y5F2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PCDHB11Q9Y5F2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB11Q9Y5F2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDHB11Q9Y5F2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB11Q9Y5F2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB11Q9Y5F2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB11Q9Y5F2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB11Q9Y5F2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
PCDHB11Q9Y5F2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.84■■□□□ 1.25
PCDHB11Q9Y5F2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.84■■□□□ 1.25
PCDHB11Q9Y5F2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB11Q9Y5F2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
PCDHB11Q9Y5F2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
PCDHB11Q9Y5F2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
PCDHB11Q9Y5F2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB11Q9Y5F2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB11Q9Y5F2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB11Q9Y5F2 FOXO3B-201ENST00000395675 1928 ntBASIC22.83■■□□□ 1.25
PCDHB11Q9Y5F2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PCDHB11Q9Y5F2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB11Q9Y5F2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PCDHB11Q9Y5F2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.83■■□□□ 1.25
PCDHB11Q9Y5F2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB11Q9Y5F2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.82■■□□□ 1.24
PCDHB11Q9Y5F2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.82■■□□□ 1.24
PCDHB11Q9Y5F2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB11Q9Y5F2 KRT18P24-201ENST00000344739 1156 ntBASIC22.82■■□□□ 1.24
PCDHB11Q9Y5F2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
PCDHB11Q9Y5F2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDHB11Q9Y5F2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB11Q9Y5F2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PCDHB11Q9Y5F2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDHB11Q9Y5F2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB11Q9Y5F2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB11Q9Y5F2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB11Q9Y5F2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB11Q9Y5F2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB11Q9Y5F2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDHB11Q9Y5F2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB11Q9Y5F2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB11Q9Y5F2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
PCDHB11Q9Y5F2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB11Q9Y5F2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB11Q9Y5F2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB11Q9Y5F2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDHB11Q9Y5F2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
PCDHB11Q9Y5F2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHB11Q9Y5F2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHB11Q9Y5F2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHB11Q9Y5F2 KRT16P3-201ENST00000439127 1283 ntBASIC22.79■■□□□ 1.24
PCDHB11Q9Y5F2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.79■■□□□ 1.24
PCDHB11Q9Y5F2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.79■■□□□ 1.24
PCDHB11Q9Y5F2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
PCDHB11Q9Y5F2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHB11Q9Y5F2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
PCDHB11Q9Y5F2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHB11Q9Y5F2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHB11Q9Y5F2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.78■■□□□ 1.24
PCDHB11Q9Y5F2 SLC6A10P-202ENST00000431994 2058 ntBASIC22.78■■□□□ 1.24
PCDHB11Q9Y5F2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHB11Q9Y5F2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDHB11Q9Y5F2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHB11Q9Y5F2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDHB11Q9Y5F2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDHB11Q9Y5F2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDHB11Q9Y5F2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHB11Q9Y5F2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHB11Q9Y5F2 AC142381.3-201ENST00000568208 1670 ntBASIC22.77■■□□□ 1.24
PCDHB11Q9Y5F2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHB11Q9Y5F2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDHB11Q9Y5F2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHB11Q9Y5F2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDHB11Q9Y5F2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.76■■□□□ 1.23
PCDHB11Q9Y5F2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.76■■□□□ 1.23
PCDHB11Q9Y5F2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
PCDHB11Q9Y5F2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHB11Q9Y5F2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHB11Q9Y5F2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHB11Q9Y5F2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHB11Q9Y5F2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHB11Q9Y5F2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHB11Q9Y5F2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHB11Q9Y5F2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHB11Q9Y5F2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHB11Q9Y5F2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.74■■□□□ 1.23
PCDHB11Q9Y5F2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHB11Q9Y5F2 AC093323.1-202ENST00000635031 2045 ntBASIC22.74■■□□□ 1.23
PCDHB11Q9Y5F2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHB11Q9Y5F2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
PCDHB11Q9Y5F2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDHB11Q9Y5F2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.74■■□□□ 1.23
PCDHB11Q9Y5F2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHB11Q9Y5F2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHB11Q9Y5F2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHB11Q9Y5F2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms