Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
EXOSC1Q9Y3B2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
EXOSC1Q9Y3B2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
EXOSC1Q9Y3B2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.92
EXOSC1Q9Y3B2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
EXOSC1Q9Y3B2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
EXOSC1Q9Y3B2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXOSC1Q9Y3B2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXOSC1Q9Y3B2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.82■□□□□ 0.92
EXOSC1Q9Y3B2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXOSC1Q9Y3B2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXOSC1Q9Y3B2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.82■□□□□ 0.92
EXOSC1Q9Y3B2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXOSC1Q9Y3B2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
EXOSC1Q9Y3B2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
EXOSC1Q9Y3B2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXOSC1Q9Y3B2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
EXOSC1Q9Y3B2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXOSC1Q9Y3B2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EXOSC1Q9Y3B2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 C9orf163-202ENST00000624034 2573 ntBASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXOSC1Q9Y3B2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.79■□□□□ 0.92
EXOSC1Q9Y3B2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXOSC1Q9Y3B2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXOSC1Q9Y3B2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXOSC1Q9Y3B2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
EXOSC1Q9Y3B2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
EXOSC1Q9Y3B2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXOSC1Q9Y3B2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EXOSC1Q9Y3B2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXOSC1Q9Y3B2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.79■□□□□ 0.92
EXOSC1Q9Y3B2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
EXOSC1Q9Y3B2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
EXOSC1Q9Y3B2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.79■□□□□ 0.92
EXOSC1Q9Y3B2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EXOSC1Q9Y3B2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXOSC1Q9Y3B2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXOSC1Q9Y3B2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.78■□□□□ 0.92
EXOSC1Q9Y3B2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.78■□□□□ 0.92
EXOSC1Q9Y3B2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXOSC1Q9Y3B2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXOSC1Q9Y3B2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXOSC1Q9Y3B2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXOSC1Q9Y3B2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXOSC1Q9Y3B2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXOSC1Q9Y3B2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EXOSC1Q9Y3B2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXOSC1Q9Y3B2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.77■□□□□ 0.92
EXOSC1Q9Y3B2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
EXOSC1Q9Y3B2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
EXOSC1Q9Y3B2 MIR3960-201ENST00000583311 91 ntBASIC20.77■□□□□ 0.92
EXOSC1Q9Y3B2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.77■□□□□ 0.92
EXOSC1Q9Y3B2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
EXOSC1Q9Y3B2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXOSC1Q9Y3B2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
EXOSC1Q9Y3B2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXOSC1Q9Y3B2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.77■□□□□ 0.92
EXOSC1Q9Y3B2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EXOSC1Q9Y3B2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EXOSC1Q9Y3B2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXOSC1Q9Y3B2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXOSC1Q9Y3B2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.76■□□□□ 0.91
EXOSC1Q9Y3B2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXOSC1Q9Y3B2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.76■□□□□ 0.91
EXOSC1Q9Y3B2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
EXOSC1Q9Y3B2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
EXOSC1Q9Y3B2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.76■□□□□ 0.91
EXOSC1Q9Y3B2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXOSC1Q9Y3B2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EXOSC1Q9Y3B2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EXOSC1Q9Y3B2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
EXOSC1Q9Y3B2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
EXOSC1Q9Y3B2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EXOSC1Q9Y3B2 AL117328.2-201ENST00000624617 1940 ntBASIC20.75■□□□□ 0.91
EXOSC1Q9Y3B2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.75■□□□□ 0.91
EXOSC1Q9Y3B2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.75■□□□□ 0.91
EXOSC1Q9Y3B2 AC025884.2-201ENST00000553429 711 ntBASIC20.75■□□□□ 0.91
EXOSC1Q9Y3B2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.75■□□□□ 0.91
EXOSC1Q9Y3B2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
EXOSC1Q9Y3B2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.75■□□□□ 0.91
EXOSC1Q9Y3B2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EXOSC1Q9Y3B2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
EXOSC1Q9Y3B2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EXOSC1Q9Y3B2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.74■□□□□ 0.91
EXOSC1Q9Y3B2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.74■□□□□ 0.91
EXOSC1Q9Y3B2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXOSC1Q9Y3B2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms