Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 MIR6089-201ENST00000616698 64 ntBASIC26.87■■□□□ 1.89
PCDHA6Q9UN73 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHA6Q9UN73 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHA6Q9UN73 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
PCDHA6Q9UN73 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.86■■□□□ 1.89
PCDHA6Q9UN73 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.86■■□□□ 1.89
PCDHA6Q9UN73 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHA6Q9UN73 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
PCDHA6Q9UN73 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
PCDHA6Q9UN73 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
PCDHA6Q9UN73 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.85■■□□□ 1.89
PCDHA6Q9UN73 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA6Q9UN73 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.84■■□□□ 1.89
PCDHA6Q9UN73 AC011551.1-201ENST00000614101 683 ntBASIC26.84■■□□□ 1.89
PCDHA6Q9UN73 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.84■■□□□ 1.89
PCDHA6Q9UN73 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA6Q9UN73 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA6Q9UN73 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA6Q9UN73 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.83■■□□□ 1.89
PCDHA6Q9UN73 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.83■■□□□ 1.89
PCDHA6Q9UN73 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.83■■□□□ 1.89
PCDHA6Q9UN73 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
PCDHA6Q9UN73 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.83■■□□□ 1.88
PCDHA6Q9UN73 AC090877.2-201ENST00000558441 1738 ntBASIC26.82■■□□□ 1.88
PCDHA6Q9UN73 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.82■■□□□ 1.88
PCDHA6Q9UN73 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA6Q9UN73 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA6Q9UN73 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
PCDHA6Q9UN73 MIR4281-201ENST00000580852 62 ntBASIC26.82■■□□□ 1.88
PCDHA6Q9UN73 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
PCDHA6Q9UN73 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.82■■□□□ 1.88
PCDHA6Q9UN73 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.82■■□□□ 1.88
PCDHA6Q9UN73 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA6Q9UN73 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA6Q9UN73 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHA6Q9UN73 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHA6Q9UN73 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHA6Q9UN73 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHA6Q9UN73 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.81■■□□□ 1.88
PCDHA6Q9UN73 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.8■■□□□ 1.88
PCDHA6Q9UN73 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHA6Q9UN73 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
PCDHA6Q9UN73 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.8■■□□□ 1.88
PCDHA6Q9UN73 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHA6Q9UN73 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.8■■□□□ 1.88
PCDHA6Q9UN73 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHA6Q9UN73 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.79■■□□□ 1.88
PCDHA6Q9UN73 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHA6Q9UN73 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
PCDHA6Q9UN73 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHA6Q9UN73 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.79■■□□□ 1.88
PCDHA6Q9UN73 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.78■■□□□ 1.88
PCDHA6Q9UN73 AC239859.2-201ENST00000444165 318 ntBASIC26.78■■□□□ 1.88
PCDHA6Q9UN73 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHA6Q9UN73 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.78■■□□□ 1.88
PCDHA6Q9UN73 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.78■■□□□ 1.88
PCDHA6Q9UN73 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.78■■□□□ 1.88
PCDHA6Q9UN73 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHA6Q9UN73 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHA6Q9UN73 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHA6Q9UN73 AP003733.4-201ENST00000623785 1697 ntBASIC26.77■■□□□ 1.88
PCDHA6Q9UN73 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.77■■□□□ 1.88
PCDHA6Q9UN73 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.77■■□□□ 1.88
PCDHA6Q9UN73 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.77■■□□□ 1.88
PCDHA6Q9UN73 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.77■■□□□ 1.88
PCDHA6Q9UN73 AC137630.3-201ENST00000607245 391 ntBASIC26.77■■□□□ 1.88
PCDHA6Q9UN73 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
PCDHA6Q9UN73 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.88
PCDHA6Q9UN73 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA6Q9UN73 Z92544.1-202ENST00000571933 1220 ntBASIC26.76■■□□□ 1.87
PCDHA6Q9UN73 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA6Q9UN73 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA6Q9UN73 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA6Q9UN73 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA6Q9UN73 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
PCDHA6Q9UN73 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA6Q9UN73 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA6Q9UN73 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA6Q9UN73 BX664725.1-201ENST00000438252 379 ntBASIC26.74■■□□□ 1.87
PCDHA6Q9UN73 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
PCDHA6Q9UN73 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.74■■□□□ 1.87
PCDHA6Q9UN73 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.74■■□□□ 1.87
PCDHA6Q9UN73 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA6Q9UN73 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA6Q9UN73 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA6Q9UN73 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.73■■□□□ 1.87
PCDHA6Q9UN73 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
PCDHA6Q9UN73 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA6Q9UN73 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA6Q9UN73 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
PCDHA6Q9UN73 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
PCDHA6Q9UN73 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA6Q9UN73 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.72■■□□□ 1.87
PCDHA6Q9UN73 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA6Q9UN73 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA6Q9UN73 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.71■■□□□ 1.87
PCDHA6Q9UN73 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHA6Q9UN73 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHA6Q9UN73 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHA6Q9UN73 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms