Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
UBQLN1Q9UMX0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
UBQLN1Q9UMX0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.18■■□□□ 1.62
UBQLN1Q9UMX0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
UBQLN1Q9UMX0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.17■■□□□ 1.62
UBQLN1Q9UMX0 AL356441.2-201ENST00000443009 864 ntBASIC25.17■■□□□ 1.62
UBQLN1Q9UMX0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
UBQLN1Q9UMX0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
UBQLN1Q9UMX0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.16■■□□□ 1.62
UBQLN1Q9UMX0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
UBQLN1Q9UMX0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.16■■□□□ 1.62
UBQLN1Q9UMX0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.16■■□□□ 1.62
UBQLN1Q9UMX0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.16■■□□□ 1.62
UBQLN1Q9UMX0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.16■■□□□ 1.62
UBQLN1Q9UMX0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.16■■□□□ 1.62
UBQLN1Q9UMX0 UNC93B8-201ENST00000511903 705 ntBASIC25.16■■□□□ 1.62
UBQLN1Q9UMX0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.16■■□□□ 1.62
UBQLN1Q9UMX0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.16■■□□□ 1.62
UBQLN1Q9UMX0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
UBQLN1Q9UMX0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
UBQLN1Q9UMX0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.16■■□□□ 1.62
UBQLN1Q9UMX0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
UBQLN1Q9UMX0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.15■■□□□ 1.62
UBQLN1Q9UMX0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.15■■□□□ 1.62
UBQLN1Q9UMX0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.15■■□□□ 1.62
UBQLN1Q9UMX0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
UBQLN1Q9UMX0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.15■■□□□ 1.62
UBQLN1Q9UMX0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
UBQLN1Q9UMX0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
UBQLN1Q9UMX0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
UBQLN1Q9UMX0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
UBQLN1Q9UMX0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
UBQLN1Q9UMX0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
UBQLN1Q9UMX0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
UBQLN1Q9UMX0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
UBQLN1Q9UMX0 TSPY9P-201ENST00000440215 945 ntBASIC25.13■■□□□ 1.61
UBQLN1Q9UMX0 TSPY11P-201ENST00000442607 1045 ntBASIC25.13■■□□□ 1.61
UBQLN1Q9UMX0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
UBQLN1Q9UMX0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
UBQLN1Q9UMX0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.12■■□□□ 1.61
UBQLN1Q9UMX0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBQLN1Q9UMX0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
UBQLN1Q9UMX0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.12■■□□□ 1.61
UBQLN1Q9UMX0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.12■■□□□ 1.61
UBQLN1Q9UMX0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
UBQLN1Q9UMX0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
UBQLN1Q9UMX0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBQLN1Q9UMX0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBQLN1Q9UMX0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBQLN1Q9UMX0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.11■■□□□ 1.61
UBQLN1Q9UMX0 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.11■■□□□ 1.61
UBQLN1Q9UMX0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBQLN1Q9UMX0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBQLN1Q9UMX0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
UBQLN1Q9UMX0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UBQLN1Q9UMX0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.1■■□□□ 1.61
UBQLN1Q9UMX0 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.1■■□□□ 1.61
UBQLN1Q9UMX0 KRT16P3-201ENST00000439127 1283 ntBASIC25.1■■□□□ 1.61
UBQLN1Q9UMX0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.1■■□□□ 1.61
UBQLN1Q9UMX0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.1■■□□□ 1.61
UBQLN1Q9UMX0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UBQLN1Q9UMX0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.1■■□□□ 1.61
UBQLN1Q9UMX0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
UBQLN1Q9UMX0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.09■■□□□ 1.61
UBQLN1Q9UMX0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.09■■□□□ 1.61
UBQLN1Q9UMX0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
UBQLN1Q9UMX0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
UBQLN1Q9UMX0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
UBQLN1Q9UMX0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBQLN1Q9UMX0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBQLN1Q9UMX0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
UBQLN1Q9UMX0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.08■■□□□ 1.61
UBQLN1Q9UMX0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
UBQLN1Q9UMX0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.08■■□□□ 1.61
UBQLN1Q9UMX0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
UBQLN1Q9UMX0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
UBQLN1Q9UMX0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
UBQLN1Q9UMX0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
UBQLN1Q9UMX0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
UBQLN1Q9UMX0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
UBQLN1Q9UMX0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
UBQLN1Q9UMX0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
UBQLN1Q9UMX0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
UBQLN1Q9UMX0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.07■■□□□ 1.6
UBQLN1Q9UMX0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.07■■□□□ 1.6
UBQLN1Q9UMX0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
UBQLN1Q9UMX0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
UBQLN1Q9UMX0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
UBQLN1Q9UMX0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.06■■□□□ 1.6
UBQLN1Q9UMX0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.06■■□□□ 1.6
UBQLN1Q9UMX0 MTDHP2-201ENST00000601468 714 ntBASIC25.06■■□□□ 1.6
UBQLN1Q9UMX0 AC131212.1-201ENST00000613771 668 ntBASIC25.06■■□□□ 1.6
UBQLN1Q9UMX0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
UBQLN1Q9UMX0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
UBQLN1Q9UMX0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
UBQLN1Q9UMX0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.05■■□□□ 1.6
UBQLN1Q9UMX0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
UBQLN1Q9UMX0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.05■■□□□ 1.6
UBQLN1Q9UMX0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.05■■□□□ 1.6
UBQLN1Q9UMX0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms