Protein–RNA interactions for Protein: Q9UHJ6

SHPK, Sedoheptulokinase, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHPKQ9UHJ6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SHPKQ9UHJ6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SHPKQ9UHJ6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SHPKQ9UHJ6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHPKQ9UHJ6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHPKQ9UHJ6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHPKQ9UHJ6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHPKQ9UHJ6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHPKQ9UHJ6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHPKQ9UHJ6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.38■□□□□ 0.69
SHPKQ9UHJ6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
SHPKQ9UHJ6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHPKQ9UHJ6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHPKQ9UHJ6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHPKQ9UHJ6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SHPKQ9UHJ6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHPKQ9UHJ6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHPKQ9UHJ6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHPKQ9UHJ6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHPKQ9UHJ6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.37■□□□□ 0.69
SHPKQ9UHJ6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.37■□□□□ 0.69
SHPKQ9UHJ6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHPKQ9UHJ6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHPKQ9UHJ6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHPKQ9UHJ6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHPKQ9UHJ6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHPKQ9UHJ6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHPKQ9UHJ6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHPKQ9UHJ6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SHPKQ9UHJ6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHPKQ9UHJ6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.36■□□□□ 0.69
SHPKQ9UHJ6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SHPKQ9UHJ6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.36■□□□□ 0.69
SHPKQ9UHJ6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.36■□□□□ 0.69
SHPKQ9UHJ6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHPKQ9UHJ6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 LINC01971-201ENST00000617888 1048 ntBASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 PKD1P6-201ENST00000343738 4769 ntBASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHPKQ9UHJ6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 DUX4L13-201ENST00000554103 1267 ntBASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 DUX4L15-201ENST00000611059 1267 ntBASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 DUX4L23-201ENST00000615195 1269 ntBASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 DUX4L24-201ENST00000617576 1269 ntBASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 DUX4L22-201ENST00000618238 1269 ntBASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 DUX4L20-201ENST00000619712 1269 ntBASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 DUX4L21-201ENST00000622058 1269 ntBASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 DUX4L10-201ENST00000622460 1267 ntBASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 DUX4L25-201ENST00000624915 1269 ntBASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.34■□□□□ 0.69
SHPKQ9UHJ6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHPKQ9UHJ6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SHPKQ9UHJ6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHPKQ9UHJ6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.33■□□□□ 0.69
SHPKQ9UHJ6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHPKQ9UHJ6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.33■□□□□ 0.69
SHPKQ9UHJ6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHPKQ9UHJ6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHPKQ9UHJ6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.33■□□□□ 0.68
SHPKQ9UHJ6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SHPKQ9UHJ6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.33■□□□□ 0.68
SHPKQ9UHJ6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHPKQ9UHJ6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SHPKQ9UHJ6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHPKQ9UHJ6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHPKQ9UHJ6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms