Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 RARRES2P11-201ENST00000635158 484 ntBASIC28.51■■■□□ 2.15
MKRN1Q9UHC7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
MKRN1Q9UHC7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.51■■■□□ 2.15
MKRN1Q9UHC7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
MKRN1Q9UHC7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
MKRN1Q9UHC7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
MKRN1Q9UHC7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.5■■■□□ 2.15
MKRN1Q9UHC7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
MKRN1Q9UHC7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
MKRN1Q9UHC7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
MKRN1Q9UHC7 MIR4281-201ENST00000580852 62 ntBASIC28.5■■■□□ 2.15
MKRN1Q9UHC7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
MKRN1Q9UHC7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
MKRN1Q9UHC7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC28.5■■■□□ 2.15
MKRN1Q9UHC7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
MKRN1Q9UHC7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC28.49■■■□□ 2.15
MKRN1Q9UHC7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
MKRN1Q9UHC7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
MKRN1Q9UHC7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
MKRN1Q9UHC7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.48■■■□□ 2.15
MKRN1Q9UHC7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
MKRN1Q9UHC7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC28.48■■■□□ 2.15
MKRN1Q9UHC7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
MKRN1Q9UHC7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
MKRN1Q9UHC7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
MKRN1Q9UHC7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
MKRN1Q9UHC7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
MKRN1Q9UHC7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC28.47■■■□□ 2.15
MKRN1Q9UHC7 AL355001.2-201ENST00000620617 1191 ntBASIC28.47■■■□□ 2.15
MKRN1Q9UHC7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
MKRN1Q9UHC7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
MKRN1Q9UHC7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
MKRN1Q9UHC7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
MKRN1Q9UHC7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC28.46■■■□□ 2.15
MKRN1Q9UHC7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.46■■■□□ 2.15
MKRN1Q9UHC7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.46■■■□□ 2.15
MKRN1Q9UHC7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.46■■■□□ 2.15
MKRN1Q9UHC7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
MKRN1Q9UHC7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.46■■■□□ 2.15
MKRN1Q9UHC7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC28.46■■■□□ 2.15
MKRN1Q9UHC7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
MKRN1Q9UHC7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.45■■■□□ 2.15
MKRN1Q9UHC7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.15
MKRN1Q9UHC7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
MKRN1Q9UHC7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
MKRN1Q9UHC7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
MKRN1Q9UHC7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
MKRN1Q9UHC7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
MKRN1Q9UHC7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC28.44■■■□□ 2.14
MKRN1Q9UHC7 EDA-201ENST00000338901 1233 ntBASIC28.44■■■□□ 2.14
MKRN1Q9UHC7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.44■■■□□ 2.14
MKRN1Q9UHC7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC28.44■■■□□ 2.14
MKRN1Q9UHC7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
MKRN1Q9UHC7 ERN1-208ENST00000606895 2068 ntBASIC28.44■■■□□ 2.14
MKRN1Q9UHC7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.43■■■□□ 2.14
MKRN1Q9UHC7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
MKRN1Q9UHC7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
MKRN1Q9UHC7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
MKRN1Q9UHC7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
MKRN1Q9UHC7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.42■■■□□ 2.14
MKRN1Q9UHC7 AC096887.2-201ENST00000623443 1957 ntBASIC28.42■■■□□ 2.14
MKRN1Q9UHC7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
MKRN1Q9UHC7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
MKRN1Q9UHC7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
MKRN1Q9UHC7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
MKRN1Q9UHC7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC28.42■■■□□ 2.14
MKRN1Q9UHC7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
MKRN1Q9UHC7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
MKRN1Q9UHC7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.41■■■□□ 2.14
MKRN1Q9UHC7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.41■■■□□ 2.14
MKRN1Q9UHC7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.41■■■□□ 2.14
MKRN1Q9UHC7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
MKRN1Q9UHC7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
MKRN1Q9UHC7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
MKRN1Q9UHC7 AC024257.2-201ENST00000549699 147 ntBASIC28.4■■■□□ 2.14
MKRN1Q9UHC7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
MKRN1Q9UHC7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.39■■■□□ 2.14
MKRN1Q9UHC7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
MKRN1Q9UHC7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.39■■■□□ 2.14
MKRN1Q9UHC7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC28.39■■■□□ 2.14
MKRN1Q9UHC7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
MKRN1Q9UHC7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC28.39■■■□□ 2.13
MKRN1Q9UHC7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
MKRN1Q9UHC7 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.38■■■□□ 2.13
MKRN1Q9UHC7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
MKRN1Q9UHC7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.38■■■□□ 2.13
MKRN1Q9UHC7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC28.38■■■□□ 2.13
MKRN1Q9UHC7 AL136967.2-201ENST00000623968 743 ntBASIC28.38■■■□□ 2.13
MKRN1Q9UHC7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.38■■■□□ 2.13
MKRN1Q9UHC7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
MKRN1Q9UHC7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
MKRN1Q9UHC7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
MKRN1Q9UHC7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
MKRN1Q9UHC7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.37■■■□□ 2.13
MKRN1Q9UHC7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
MKRN1Q9UHC7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
MKRN1Q9UHC7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
MKRN1Q9UHC7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.37■■■□□ 2.13
MKRN1Q9UHC7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC28.36■■■□□ 2.13
MKRN1Q9UHC7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms