Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.47■■□□□ 1.03
LRFN1Q9P244 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.47■■□□□ 1.03
LRFN1Q9P244 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.47■■□□□ 1.03
LRFN1Q9P244 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.47■■□□□ 1.03
LRFN1Q9P244 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN1Q9P244 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
LRFN1Q9P244 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.46■■□□□ 1.03
LRFN1Q9P244 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
LRFN1Q9P244 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRFN1Q9P244 AC008406.3-201ENST00000620001 1374 ntBASIC21.46■■□□□ 1.03
LRFN1Q9P244 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRFN1Q9P244 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRFN1Q9P244 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRFN1Q9P244 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN1Q9P244 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.44■■□□□ 1.02
LRFN1Q9P244 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
LRFN1Q9P244 DUSP8P4-201ENST00000399538 1761 ntBASIC21.44■■□□□ 1.02
LRFN1Q9P244 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
LRFN1Q9P244 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN1Q9P244 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN1Q9P244 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.44■■□□□ 1.02
LRFN1Q9P244 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.44■■□□□ 1.02
LRFN1Q9P244 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.44■■□□□ 1.02
LRFN1Q9P244 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN1Q9P244 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN1Q9P244 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN1Q9P244 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN1Q9P244 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.43■■□□□ 1.02
LRFN1Q9P244 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN1Q9P244 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.43■■□□□ 1.02
LRFN1Q9P244 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRFN1Q9P244 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
LRFN1Q9P244 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRFN1Q9P244 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRFN1Q9P244 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.42■■□□□ 1.02
LRFN1Q9P244 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.42■■□□□ 1.02
LRFN1Q9P244 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.42■■□□□ 1.02
LRFN1Q9P244 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.42■■□□□ 1.02
LRFN1Q9P244 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
LRFN1Q9P244 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
LRFN1Q9P244 AC091060.1-201ENST00000623524 1766 ntBASIC21.41■■□□□ 1.02
LRFN1Q9P244 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.41■■□□□ 1.02
LRFN1Q9P244 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.41■■□□□ 1.02
LRFN1Q9P244 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.41■■□□□ 1.02
LRFN1Q9P244 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
LRFN1Q9P244 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.4■■□□□ 1.02
LRFN1Q9P244 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN1Q9P244 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN1Q9P244 AC145676.1-201ENST00000514988 2004 ntBASIC21.4■■□□□ 1.02
LRFN1Q9P244 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.4■■□□□ 1.02
LRFN1Q9P244 MIR6724-1-201ENST00000616420 92 ntBASIC21.4■■□□□ 1.02
LRFN1Q9P244 MIR6724-2-201ENST00000616483 92 ntBASIC21.4■■□□□ 1.02
LRFN1Q9P244 MIR6724-4-201ENST00000617390 92 ntBASIC21.4■■□□□ 1.02
LRFN1Q9P244 MIR6724-3-201ENST00000622482 92 ntBASIC21.4■■□□□ 1.02
LRFN1Q9P244 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.4■■□□□ 1.02
LRFN1Q9P244 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
LRFN1Q9P244 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
LRFN1Q9P244 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.39■■□□□ 1.01
LRFN1Q9P244 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRFN1Q9P244 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRFN1Q9P244 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
LRFN1Q9P244 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LRFN1Q9P244 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.38■■□□□ 1.01
LRFN1Q9P244 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRFN1Q9P244 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.38■■□□□ 1.01
LRFN1Q9P244 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.38■■□□□ 1.01
LRFN1Q9P244 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.38■■□□□ 1.01
LRFN1Q9P244 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.38■■□□□ 1.01
LRFN1Q9P244 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRFN1Q9P244 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRFN1Q9P244 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
LRFN1Q9P244 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRFN1Q9P244 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.37■■□□□ 1.01
LRFN1Q9P244 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRFN1Q9P244 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LRFN1Q9P244 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
LRFN1Q9P244 AC019069.1-201ENST00000610008 1333 ntBASIC21.36■■□□□ 1.01
LRFN1Q9P244 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRFN1Q9P244 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.36■■□□□ 1.01
LRFN1Q9P244 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.36■■□□□ 1.01
LRFN1Q9P244 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.36■■□□□ 1.01
LRFN1Q9P244 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.36■■□□□ 1.01
LRFN1Q9P244 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.36■■□□□ 1.01
LRFN1Q9P244 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
LRFN1Q9P244 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRFN1Q9P244 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRFN1Q9P244 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.35■■□□□ 1.01
LRFN1Q9P244 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.35■■□□□ 1.01
LRFN1Q9P244 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.35■■□□□ 1.01
LRFN1Q9P244 AL117332.1-201ENST00000622628 974 ntBASIC21.35■■□□□ 1.01
LRFN1Q9P244 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.35■■□□□ 1.01
LRFN1Q9P244 SLC6A10P-202ENST00000431994 2058 ntBASIC21.35■■□□□ 1.01
LRFN1Q9P244 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRFN1Q9P244 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRFN1Q9P244 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.34■■□□□ 1.01
LRFN1Q9P244 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRFN1Q9P244 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.34■■□□□ 1.01
LRFN1Q9P244 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRFN1Q9P244 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRFN1Q9P244 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms