Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RYDENQ9NUL5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.38■■□□□ 1.01
RYDENQ9NUL5 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.38■■□□□ 1.01
RYDENQ9NUL5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RYDENQ9NUL5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RYDENQ9NUL5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RYDENQ9NUL5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.38■■□□□ 1.01
RYDENQ9NUL5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RYDENQ9NUL5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.37■■□□□ 1.01
RYDENQ9NUL5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.37■■□□□ 1.01
RYDENQ9NUL5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.37■■□□□ 1.01
RYDENQ9NUL5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RYDENQ9NUL5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.37■■□□□ 1.01
RYDENQ9NUL5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RYDENQ9NUL5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.37■■□□□ 1.01
RYDENQ9NUL5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RYDENQ9NUL5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RYDENQ9NUL5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RYDENQ9NUL5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RYDENQ9NUL5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RYDENQ9NUL5 STK33P1-201ENST00000423835 1218 ntBASIC21.36■■□□□ 1.01
RYDENQ9NUL5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.36■■□□□ 1.01
RYDENQ9NUL5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.36■■□□□ 1.01
RYDENQ9NUL5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RYDENQ9NUL5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RYDENQ9NUL5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RYDENQ9NUL5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.35■■□□□ 1.01
RYDENQ9NUL5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RYDENQ9NUL5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RYDENQ9NUL5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RYDENQ9NUL5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RYDENQ9NUL5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RYDENQ9NUL5 SERPINA7P1-201ENST00000443077 631 ntBASIC21.34■■□□□ 1.01
RYDENQ9NUL5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.34■■□□□ 1.01
RYDENQ9NUL5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.34■■□□□ 1.01
RYDENQ9NUL5 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RYDENQ9NUL5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RYDENQ9NUL5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RYDENQ9NUL5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RYDENQ9NUL5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RYDENQ9NUL5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.33■■□□□ 1.01
RYDENQ9NUL5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RYDENQ9NUL5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.33■■□□□ 1.01
RYDENQ9NUL5 AC004448.1-201ENST00000458332 883 ntBASIC21.33■■□□□ 1.01
RYDENQ9NUL5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.33■■□□□ 1.01
RYDENQ9NUL5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.33■■□□□ 1.01
RYDENQ9NUL5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.33■■□□□ 1.01
RYDENQ9NUL5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.33■■□□□ 1.01
RYDENQ9NUL5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RYDENQ9NUL5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.32■■□□□ 1
RYDENQ9NUL5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.32■■□□□ 1
RYDENQ9NUL5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RYDENQ9NUL5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RYDENQ9NUL5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.32■■□□□ 1
RYDENQ9NUL5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RYDENQ9NUL5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RYDENQ9NUL5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.32■■□□□ 1
RYDENQ9NUL5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.31■■□□□ 1
RYDENQ9NUL5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RYDENQ9NUL5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.31■■□□□ 1
RYDENQ9NUL5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.31■■□□□ 1
RYDENQ9NUL5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RYDENQ9NUL5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RYDENQ9NUL5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RYDENQ9NUL5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RYDENQ9NUL5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RYDENQ9NUL5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
RYDENQ9NUL5 AL022069.1-201ENST00000568025 1636 ntBASIC21.3■■□□□ 1
RYDENQ9NUL5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RYDENQ9NUL5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RYDENQ9NUL5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.3■■□□□ 1
RYDENQ9NUL5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.3■■□□□ 1
RYDENQ9NUL5 SNX5-217ENST00000606557 1087 ntBASIC21.3■■□□□ 1
RYDENQ9NUL5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.3■■□□□ 1
RYDENQ9NUL5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.3■■□□□ 1
RYDENQ9NUL5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RYDENQ9NUL5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.3■■□□□ 1
RYDENQ9NUL5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.29■■□□□ 1
RYDENQ9NUL5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.29■■□□□ 1
RYDENQ9NUL5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RYDENQ9NUL5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.29■■□□□ 1
RYDENQ9NUL5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.29■■□□□ 1
RYDENQ9NUL5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.29■■□□□ 1
RYDENQ9NUL5 MTDHP2-201ENST00000601468 714 ntBASIC21.29■■□□□ 1
RYDENQ9NUL5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.29■■□□□ 1
RYDENQ9NUL5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.29■■□□□ 1
RYDENQ9NUL5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.28■■□□□ 1
RYDENQ9NUL5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.28■■□□□ 1
RYDENQ9NUL5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RYDENQ9NUL5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.28■■□□□ 1
RYDENQ9NUL5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.28■■□□□ 1
RYDENQ9NUL5 AC142381.3-201ENST00000568208 1670 ntBASIC21.28■■□□□ 1
RYDENQ9NUL5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.27■■□□□ 1
RYDENQ9NUL5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RYDENQ9NUL5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.27■■□□□ 1
RYDENQ9NUL5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.27■■□□□ 1
RYDENQ9NUL5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
RYDENQ9NUL5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RYDENQ9NUL5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.27■■□□□ 1
RYDENQ9NUL5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms