Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MRM3Q9HC36 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
MRM3Q9HC36 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.41■■□□□ 1.34
MRM3Q9HC36 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.41■■□□□ 1.34
MRM3Q9HC36 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
MRM3Q9HC36 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.41■■□□□ 1.34
MRM3Q9HC36 AC090877.2-201ENST00000558441 1738 ntBASIC23.41■■□□□ 1.34
MRM3Q9HC36 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
MRM3Q9HC36 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.4■■□□□ 1.34
MRM3Q9HC36 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
MRM3Q9HC36 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MRM3Q9HC36 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MRM3Q9HC36 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.4■■□□□ 1.34
MRM3Q9HC36 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
MRM3Q9HC36 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
MRM3Q9HC36 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MRM3Q9HC36 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
MRM3Q9HC36 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.39■■□□□ 1.34
MRM3Q9HC36 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
MRM3Q9HC36 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.38■■□□□ 1.33
MRM3Q9HC36 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MRM3Q9HC36 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
MRM3Q9HC36 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
MRM3Q9HC36 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.38■■□□□ 1.33
MRM3Q9HC36 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.38■■□□□ 1.33
MRM3Q9HC36 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.38■■□□□ 1.33
MRM3Q9HC36 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MRM3Q9HC36 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MRM3Q9HC36 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.38■■□□□ 1.33
MRM3Q9HC36 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MRM3Q9HC36 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
MRM3Q9HC36 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.37■■□□□ 1.33
MRM3Q9HC36 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MRM3Q9HC36 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MRM3Q9HC36 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MRM3Q9HC36 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.36■■□□□ 1.33
MRM3Q9HC36 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MRM3Q9HC36 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
MRM3Q9HC36 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MRM3Q9HC36 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
MRM3Q9HC36 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MRM3Q9HC36 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
MRM3Q9HC36 AC012354.3-201ENST00000623734 483 ntBASIC23.36■■□□□ 1.33
MRM3Q9HC36 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MRM3Q9HC36 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
MRM3Q9HC36 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MRM3Q9HC36 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.36■■□□□ 1.33
MRM3Q9HC36 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
MRM3Q9HC36 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.35■■□□□ 1.33
MRM3Q9HC36 AC019171.1-201ENST00000601251 1056 ntBASIC23.35■■□□□ 1.33
MRM3Q9HC36 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
MRM3Q9HC36 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MRM3Q9HC36 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MRM3Q9HC36 AC004812.2-201ENST00000611079 2094 ntBASIC23.34■■□□□ 1.33
MRM3Q9HC36 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MRM3Q9HC36 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
MRM3Q9HC36 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
MRM3Q9HC36 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
MRM3Q9HC36 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.34■■□□□ 1.33
MRM3Q9HC36 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
MRM3Q9HC36 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.34■■□□□ 1.33
MRM3Q9HC36 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.34■■□□□ 1.33
MRM3Q9HC36 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.34■■□□□ 1.33
MRM3Q9HC36 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.34■■□□□ 1.33
MRM3Q9HC36 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.34■■□□□ 1.33
MRM3Q9HC36 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.34■■□□□ 1.33
MRM3Q9HC36 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
MRM3Q9HC36 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
MRM3Q9HC36 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MRM3Q9HC36 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.33■■□□□ 1.33
MRM3Q9HC36 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
MRM3Q9HC36 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MRM3Q9HC36 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.33■■□□□ 1.32
MRM3Q9HC36 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
MRM3Q9HC36 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
MRM3Q9HC36 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
MRM3Q9HC36 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MRM3Q9HC36 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MRM3Q9HC36 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MRM3Q9HC36 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.32■■□□□ 1.32
MRM3Q9HC36 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MRM3Q9HC36 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MRM3Q9HC36 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MRM3Q9HC36 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
MRM3Q9HC36 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
MRM3Q9HC36 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.31■■□□□ 1.32
MRM3Q9HC36 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MRM3Q9HC36 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MRM3Q9HC36 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MRM3Q9HC36 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
MRM3Q9HC36 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.3■■□□□ 1.32
MRM3Q9HC36 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.3■■□□□ 1.32
MRM3Q9HC36 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.3■■□□□ 1.32
MRM3Q9HC36 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.3■■□□□ 1.32
MRM3Q9HC36 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.3■■□□□ 1.32
MRM3Q9HC36 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
MRM3Q9HC36 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
MRM3Q9HC36 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MRM3Q9HC36 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
MRM3Q9HC36 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms