Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SH2D4AQ9H788 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SH2D4AQ9H788 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.36■■□□□ 1.97
SH2D4AQ9H788 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SH2D4AQ9H788 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.36■■□□□ 1.97
SH2D4AQ9H788 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.36■■□□□ 1.97
SH2D4AQ9H788 AL117332.1-201ENST00000622628 974 ntBASIC27.36■■□□□ 1.97
SH2D4AQ9H788 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SH2D4AQ9H788 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SH2D4AQ9H788 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SH2D4AQ9H788 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SH2D4AQ9H788 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SH2D4AQ9H788 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.35■■□□□ 1.97
SH2D4AQ9H788 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SH2D4AQ9H788 MIR3621-201ENST00000580529 85 ntBASIC27.34■■□□□ 1.97
SH2D4AQ9H788 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.34■■□□□ 1.97
SH2D4AQ9H788 AL356740.2-201ENST00000601559 647 ntBASIC27.34■■□□□ 1.97
SH2D4AQ9H788 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SH2D4AQ9H788 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
SH2D4AQ9H788 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SH2D4AQ9H788 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SH2D4AQ9H788 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SH2D4AQ9H788 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SH2D4AQ9H788 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC27.33■■□□□ 1.97
SH2D4AQ9H788 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.33■■□□□ 1.97
SH2D4AQ9H788 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SH2D4AQ9H788 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.32■■□□□ 1.96
SH2D4AQ9H788 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.32■■□□□ 1.96
SH2D4AQ9H788 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.32■■□□□ 1.96
SH2D4AQ9H788 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SH2D4AQ9H788 AC019069.1-201ENST00000610008 1333 ntBASIC27.32■■□□□ 1.96
SH2D4AQ9H788 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
SH2D4AQ9H788 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
SH2D4AQ9H788 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SH2D4AQ9H788 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC27.31■■□□□ 1.96
SH2D4AQ9H788 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.31■■□□□ 1.96
SH2D4AQ9H788 AC131281.2-201ENST00000520478 145 ntBASIC27.31■■□□□ 1.96
SH2D4AQ9H788 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SH2D4AQ9H788 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC27.3■■□□□ 1.96
SH2D4AQ9H788 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.3■■□□□ 1.96
SH2D4AQ9H788 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.3■■□□□ 1.96
SH2D4AQ9H788 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SH2D4AQ9H788 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SH2D4AQ9H788 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.3■■□□□ 1.96
SH2D4AQ9H788 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.3■■□□□ 1.96
SH2D4AQ9H788 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
SH2D4AQ9H788 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.29■■□□□ 1.96
SH2D4AQ9H788 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
SH2D4AQ9H788 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.29■■□□□ 1.96
SH2D4AQ9H788 SNX5-217ENST00000606557 1087 ntBASIC27.29■■□□□ 1.96
SH2D4AQ9H788 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SH2D4AQ9H788 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
SH2D4AQ9H788 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.28■■□□□ 1.96
SH2D4AQ9H788 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.28■■□□□ 1.96
SH2D4AQ9H788 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SH2D4AQ9H788 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.27■■□□□ 1.96
SH2D4AQ9H788 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SH2D4AQ9H788 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.27■■□□□ 1.96
SH2D4AQ9H788 LBH-205ENST00000407930 756 ntTSL 2 BASIC27.27■■□□□ 1.96
SH2D4AQ9H788 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
SH2D4AQ9H788 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.96
SH2D4AQ9H788 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.26■■□□□ 1.95
SH2D4AQ9H788 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
SH2D4AQ9H788 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SH2D4AQ9H788 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.26■■□□□ 1.95
SH2D4AQ9H788 MIR6722-201ENST00000617286 78 ntBASIC27.26■■□□□ 1.95
SH2D4AQ9H788 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.26■■□□□ 1.95
SH2D4AQ9H788 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC27.26■■□□□ 1.95
SH2D4AQ9H788 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
SH2D4AQ9H788 TFPT-201ENST00000391757 774 ntTSL 5 BASIC27.25■■□□□ 1.95
SH2D4AQ9H788 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SH2D4AQ9H788 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SH2D4AQ9H788 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC27.24■■□□□ 1.95
SH2D4AQ9H788 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SH2D4AQ9H788 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SH2D4AQ9H788 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SH2D4AQ9H788 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.24■■□□□ 1.95
SH2D4AQ9H788 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
SH2D4AQ9H788 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.24■■□□□ 1.95
SH2D4AQ9H788 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
SH2D4AQ9H788 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SH2D4AQ9H788 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC27.24■■□□□ 1.95
SH2D4AQ9H788 AL136116.3-201ENST00000402907 1138 ntBASIC27.23■■□□□ 1.95
SH2D4AQ9H788 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC27.23■■□□□ 1.95
SH2D4AQ9H788 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.23■■□□□ 1.95
SH2D4AQ9H788 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
SH2D4AQ9H788 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC27.23■■□□□ 1.95
SH2D4AQ9H788 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SH2D4AQ9H788 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.22■■□□□ 1.95
SH2D4AQ9H788 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.22■■□□□ 1.95
SH2D4AQ9H788 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SH2D4AQ9H788 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SH2D4AQ9H788 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
SH2D4AQ9H788 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SH2D4AQ9H788 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SH2D4AQ9H788 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SH2D4AQ9H788 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SH2D4AQ9H788 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
SH2D4AQ9H788 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.2■■□□□ 1.94
SH2D4AQ9H788 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms