Protein–RNA interactions for Protein: Q9H4Q3

PRDM13, PR domain zinc finger protein 13, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13Q9H4Q3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.22■□□□□ 0.67
PRDM13Q9H4Q3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.22■□□□□ 0.67
PRDM13Q9H4Q3 BX664725.1-201ENST00000438252 379 ntBASIC19.22■□□□□ 0.67
PRDM13Q9H4Q3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM13Q9H4Q3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM13Q9H4Q3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM13Q9H4Q3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM13Q9H4Q3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 KRT125P-201ENST00000546827 989 ntBASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 AC131212.1-201ENST00000613771 668 ntBASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM13Q9H4Q3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM13Q9H4Q3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM13Q9H4Q3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.19■□□□□ 0.66
PRDM13Q9H4Q3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM13Q9H4Q3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.19■□□□□ 0.66
PRDM13Q9H4Q3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM13Q9H4Q3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.19■□□□□ 0.66
PRDM13Q9H4Q3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM13Q9H4Q3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM13Q9H4Q3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
PRDM13Q9H4Q3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
PRDM13Q9H4Q3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.18■□□□□ 0.66
PRDM13Q9H4Q3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PRDM13Q9H4Q3 AC120024.1-201ENST00000562672 995 ntBASIC19.18■□□□□ 0.66
PRDM13Q9H4Q3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM13Q9H4Q3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.18■□□□□ 0.66
PRDM13Q9H4Q3 MIR4787-201ENST00000607364 84 ntBASIC19.18■□□□□ 0.66
PRDM13Q9H4Q3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.18■□□□□ 0.66
PRDM13Q9H4Q3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.18■□□□□ 0.66
PRDM13Q9H4Q3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM13Q9H4Q3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PRDM13Q9H4Q3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.17■□□□□ 0.66
PRDM13Q9H4Q3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM13Q9H4Q3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PRDM13Q9H4Q3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.17■□□□□ 0.66
PRDM13Q9H4Q3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM13Q9H4Q3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PRDM13Q9H4Q3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.17■□□□□ 0.66
PRDM13Q9H4Q3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
PRDM13Q9H4Q3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM13Q9H4Q3 AC021242.3-201ENST00000607598 1377 ntBASIC19.17■□□□□ 0.66
PRDM13Q9H4Q3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM13Q9H4Q3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM13Q9H4Q3 AC091060.1-201ENST00000623524 1766 ntBASIC19.16■□□□□ 0.66
PRDM13Q9H4Q3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM13Q9H4Q3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM13Q9H4Q3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM13Q9H4Q3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.16■□□□□ 0.66
PRDM13Q9H4Q3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.16■□□□□ 0.66
PRDM13Q9H4Q3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.16■□□□□ 0.66
PRDM13Q9H4Q3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.16■□□□□ 0.66
PRDM13Q9H4Q3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM13Q9H4Q3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM13Q9H4Q3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
PRDM13Q9H4Q3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM13Q9H4Q3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM13Q9H4Q3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM13Q9H4Q3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.15■□□□□ 0.66
PRDM13Q9H4Q3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.15■□□□□ 0.66
PRDM13Q9H4Q3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.15■□□□□ 0.66
PRDM13Q9H4Q3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM13Q9H4Q3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PRDM13Q9H4Q3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM13Q9H4Q3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM13Q9H4Q3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms