Protein–RNA interactions for Protein: Q9H1Y3

OPN3, Opsin-3, humanhuman

Predicted RBP Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3Q9H1Y3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
OPN3Q9H1Y3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPN3Q9H1Y3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
OPN3Q9H1Y3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
OPN3Q9H1Y3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.63■□□□□ 0.89
OPN3Q9H1Y3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.63■□□□□ 0.89
OPN3Q9H1Y3 MTDHP2-201ENST00000601468 714 ntBASIC20.63■□□□□ 0.89
OPN3Q9H1Y3 AC010997.5-201ENST00000609182 354 ntBASIC20.63■□□□□ 0.89
OPN3Q9H1Y3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.63■□□□□ 0.89
OPN3Q9H1Y3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
OPN3Q9H1Y3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPN3Q9H1Y3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPN3Q9H1Y3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OPN3Q9H1Y3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.62■□□□□ 0.89
OPN3Q9H1Y3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.62■□□□□ 0.89
OPN3Q9H1Y3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
OPN3Q9H1Y3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPN3Q9H1Y3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.61■□□□□ 0.89
OPN3Q9H1Y3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPN3Q9H1Y3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPN3Q9H1Y3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPN3Q9H1Y3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 AC145676.1-201ENST00000514988 2004 ntBASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
OPN3Q9H1Y3 AC008406.3-201ENST00000620001 1374 ntBASIC20.59■□□□□ 0.89
OPN3Q9H1Y3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPN3Q9H1Y3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
OPN3Q9H1Y3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPN3Q9H1Y3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPN3Q9H1Y3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
OPN3Q9H1Y3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPN3Q9H1Y3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
OPN3Q9H1Y3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
OPN3Q9H1Y3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
OPN3Q9H1Y3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
OPN3Q9H1Y3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
OPN3Q9H1Y3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
OPN3Q9H1Y3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.58■□□□□ 0.89
OPN3Q9H1Y3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.58■□□□□ 0.89
OPN3Q9H1Y3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.58■□□□□ 0.89
OPN3Q9H1Y3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.58■□□□□ 0.89
OPN3Q9H1Y3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.57■□□□□ 0.88
OPN3Q9H1Y3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
OPN3Q9H1Y3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.57■□□□□ 0.88
OPN3Q9H1Y3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
OPN3Q9H1Y3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
OPN3Q9H1Y3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
OPN3Q9H1Y3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
OPN3Q9H1Y3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
OPN3Q9H1Y3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.56■□□□□ 0.88
OPN3Q9H1Y3 SLC6A10P-202ENST00000431994 2058 ntBASIC20.56■□□□□ 0.88
OPN3Q9H1Y3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
OPN3Q9H1Y3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
OPN3Q9H1Y3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
OPN3Q9H1Y3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
OPN3Q9H1Y3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
OPN3Q9H1Y3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.55■□□□□ 0.88
OPN3Q9H1Y3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.55■□□□□ 0.88
OPN3Q9H1Y3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.55■□□□□ 0.88
OPN3Q9H1Y3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.55■□□□□ 0.88
OPN3Q9H1Y3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
OPN3Q9H1Y3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
OPN3Q9H1Y3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.55■□□□□ 0.88
OPN3Q9H1Y3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.54■□□□□ 0.88
OPN3Q9H1Y3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.54■□□□□ 0.88
OPN3Q9H1Y3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.54■□□□□ 0.88
OPN3Q9H1Y3 MIR6724-1-201ENST00000616420 92 ntBASIC20.54■□□□□ 0.88
OPN3Q9H1Y3 MIR6724-2-201ENST00000616483 92 ntBASIC20.54■□□□□ 0.88
OPN3Q9H1Y3 MIR6724-4-201ENST00000617390 92 ntBASIC20.54■□□□□ 0.88
OPN3Q9H1Y3 MIR6724-3-201ENST00000622482 92 ntBASIC20.54■□□□□ 0.88
OPN3Q9H1Y3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
OPN3Q9H1Y3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
OPN3Q9H1Y3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
OPN3Q9H1Y3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.53■□□□□ 0.88
OPN3Q9H1Y3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPN3Q9H1Y3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPN3Q9H1Y3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.53■□□□□ 0.88
OPN3Q9H1Y3 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.53■□□□□ 0.88
OPN3Q9H1Y3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.53■□□□□ 0.88
OPN3Q9H1Y3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
OPN3Q9H1Y3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPN3Q9H1Y3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
OPN3Q9H1Y3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.52■□□□□ 0.88
OPN3Q9H1Y3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.52■□□□□ 0.88
OPN3Q9H1Y3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.52■□□□□ 0.88
OPN3Q9H1Y3 AL117332.1-201ENST00000622628 974 ntBASIC20.52■□□□□ 0.88
OPN3Q9H1Y3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
OPN3Q9H1Y3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms