Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALX4Q9H161 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALX4Q9H161 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ALX4Q9H161 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALX4Q9H161 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALX4Q9H161 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.65■□□□□ 0.74
ALX4Q9H161 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALX4Q9H161 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALX4Q9H161 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ALX4Q9H161 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ALX4Q9H161 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ALX4Q9H161 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALX4Q9H161 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.64■□□□□ 0.73
ALX4Q9H161 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALX4Q9H161 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALX4Q9H161 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALX4Q9H161 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ALX4Q9H161 AC233723.2-201ENST00000623798 2106 ntBASIC19.63■□□□□ 0.73
ALX4Q9H161 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
ALX4Q9H161 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.63■□□□□ 0.73
ALX4Q9H161 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.63■□□□□ 0.73
ALX4Q9H161 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALX4Q9H161 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALX4Q9H161 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.63■□□□□ 0.73
ALX4Q9H161 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ALX4Q9H161 LINC00565-201ENST00000562710 2331 ntBASIC19.63■□□□□ 0.73
ALX4Q9H161 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALX4Q9H161 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.63■□□□□ 0.73
ALX4Q9H161 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ALX4Q9H161 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ALX4Q9H161 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ALX4Q9H161 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ALX4Q9H161 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ALX4Q9H161 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.62■□□□□ 0.73
ALX4Q9H161 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.62■□□□□ 0.73
ALX4Q9H161 MIR6089-201ENST00000616698 64 ntBASIC19.62■□□□□ 0.73
ALX4Q9H161 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ALX4Q9H161 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALX4Q9H161 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.61■□□□□ 0.73
ALX4Q9H161 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ALX4Q9H161 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALX4Q9H161 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALX4Q9H161 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALX4Q9H161 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALX4Q9H161 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALX4Q9H161 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ALX4Q9H161 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ALX4Q9H161 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALX4Q9H161 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.61■□□□□ 0.73
ALX4Q9H161 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALX4Q9H161 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.6■□□□□ 0.73
ALX4Q9H161 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ALX4Q9H161 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALX4Q9H161 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ALX4Q9H161 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ALX4Q9H161 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.6■□□□□ 0.73
ALX4Q9H161 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
ALX4Q9H161 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ALX4Q9H161 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALX4Q9H161 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.6■□□□□ 0.73
ALX4Q9H161 EP400NL-214ENST00000641289 2402 ntBASIC19.6■□□□□ 0.73
ALX4Q9H161 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ALX4Q9H161 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALX4Q9H161 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ALX4Q9H161 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALX4Q9H161 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALX4Q9H161 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALX4Q9H161 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALX4Q9H161 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.59■□□□□ 0.73
ALX4Q9H161 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ALX4Q9H161 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALX4Q9H161 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
ALX4Q9H161 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ALX4Q9H161 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
ALX4Q9H161 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ALX4Q9H161 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ALX4Q9H161 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
ALX4Q9H161 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
ALX4Q9H161 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALX4Q9H161 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ALX4Q9H161 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.58■□□□□ 0.72
ALX4Q9H161 AL359504.2-201ENST00000605506 1601 ntBASIC19.58■□□□□ 0.72
ALX4Q9H161 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
ALX4Q9H161 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ALX4Q9H161 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALX4Q9H161 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALX4Q9H161 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.57■□□□□ 0.72
ALX4Q9H161 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALX4Q9H161 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALX4Q9H161 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALX4Q9H161 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALX4Q9H161 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALX4Q9H161 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALX4Q9H161 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ALX4Q9H161 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ALX4Q9H161 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALX4Q9H161 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALX4Q9H161 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.56■□□□□ 0.72
ALX4Q9H161 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALX4Q9H161 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms