Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC097639.1-201ENST00000565519 1891 ntBASIC13.78□□□□□ -0.2
LIMD2Q9BT23 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC13.77□□□□□ -0.2
LIMD2Q9BT23 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LIMD2Q9BT23 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LIMD2Q9BT23 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LIMD2Q9BT23 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LIMD2Q9BT23 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIMD2Q9BT23 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIMD2Q9BT23 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LIMD2Q9BT23 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIMD2Q9BT23 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIMD2Q9BT23 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC13.77□□□□□ -0.21
LIMD2Q9BT23 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LIMD2Q9BT23 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
LIMD2Q9BT23 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIMD2Q9BT23 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC13.76□□□□□ -0.21
LIMD2Q9BT23 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIMD2Q9BT23 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LIMD2Q9BT23 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIMD2Q9BT23 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
LIMD2Q9BT23 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC13.76□□□□□ -0.21
LIMD2Q9BT23 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIMD2Q9BT23 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LIMD2Q9BT23 CEBPA-AS1-201ENST00000592982 2198 ntBASIC13.76□□□□□ -0.21
LIMD2Q9BT23 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIMD2Q9BT23 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LIMD2Q9BT23 AC096887.2-201ENST00000623443 1957 ntBASIC13.76□□□□□ -0.21
LIMD2Q9BT23 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LIMD2Q9BT23 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LIMD2Q9BT23 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LIMD2Q9BT23 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIMD2Q9BT23 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIMD2Q9BT23 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIMD2Q9BT23 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LIMD2Q9BT23 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIMD2Q9BT23 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LIMD2Q9BT23 ABHD17AP3-201ENST00000503096 1137 ntBASIC13.75□□□□□ -0.21
LIMD2Q9BT23 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LIMD2Q9BT23 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIMD2Q9BT23 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 RNF126P1-201ENST00000567452 1320 ntBASIC13.74□□□□□ -0.21
LIMD2Q9BT23 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC13.74□□□□□ -0.21
LIMD2Q9BT23 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIMD2Q9BT23 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIMD2Q9BT23 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC13.73□□□□□ -0.21
LIMD2Q9BT23 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIMD2Q9BT23 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LIMD2Q9BT23 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LIMD2Q9BT23 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIMD2Q9BT23 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LIMD2Q9BT23 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIMD2Q9BT23 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LIMD2Q9BT23 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC13.72□□□□□ -0.21
LIMD2Q9BT23 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIMD2Q9BT23 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIMD2Q9BT23 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIMD2Q9BT23 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIMD2Q9BT23 AC142381.3-201ENST00000568208 1670 ntBASIC13.72□□□□□ -0.21
LIMD2Q9BT23 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIMD2Q9BT23 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LIMD2Q9BT23 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
LIMD2Q9BT23 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIMD2Q9BT23 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIMD2Q9BT23 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIMD2Q9BT23 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIMD2Q9BT23 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIMD2Q9BT23 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LIMD2Q9BT23 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LIMD2Q9BT23 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
LIMD2Q9BT23 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIMD2Q9BT23 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC13.71□□□□□ -0.21
LIMD2Q9BT23 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
LIMD2Q9BT23 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
LIMD2Q9BT23 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LIMD2Q9BT23 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIMD2Q9BT23 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIMD2Q9BT23 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIMD2Q9BT23 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LIMD2Q9BT23 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIMD2Q9BT23 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIMD2Q9BT23 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LIMD2Q9BT23 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LIMD2Q9BT23 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms