Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
NECTIN4Q96NY8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NECTIN4Q96NY8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NECTIN4Q96NY8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.43■■□□□ 1.5
NECTIN4Q96NY8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.43■■□□□ 1.5
NECTIN4Q96NY8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.43■■□□□ 1.5
NECTIN4Q96NY8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NECTIN4Q96NY8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NECTIN4Q96NY8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.42■■□□□ 1.5
NECTIN4Q96NY8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NECTIN4Q96NY8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NECTIN4Q96NY8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.42■■□□□ 1.5
NECTIN4Q96NY8 MIR939-201ENST00000401314 82 ntBASIC24.42■■□□□ 1.5
NECTIN4Q96NY8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NECTIN4Q96NY8 AC004448.1-201ENST00000458332 883 ntBASIC24.42■■□□□ 1.5
NECTIN4Q96NY8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
NECTIN4Q96NY8 MIR6821-201ENST00000617625 74 ntBASIC24.42■■□□□ 1.5
NECTIN4Q96NY8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NECTIN4Q96NY8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
NECTIN4Q96NY8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NECTIN4Q96NY8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.41■■□□□ 1.5
NECTIN4Q96NY8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NECTIN4Q96NY8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.4■■□□□ 1.5
NECTIN4Q96NY8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
NECTIN4Q96NY8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.4■■□□□ 1.5
NECTIN4Q96NY8 AC091305.1-201ENST00000479476 895 ntBASIC24.4■■□□□ 1.5
NECTIN4Q96NY8 AC092171.4-201ENST00000609130 632 ntBASIC24.4■■□□□ 1.5
NECTIN4Q96NY8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
NECTIN4Q96NY8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
NECTIN4Q96NY8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
NECTIN4Q96NY8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NECTIN4Q96NY8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NECTIN4Q96NY8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.39■■□□□ 1.5
NECTIN4Q96NY8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.39■■□□□ 1.5
NECTIN4Q96NY8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NECTIN4Q96NY8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NECTIN4Q96NY8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.39■■□□□ 1.49
NECTIN4Q96NY8 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.39■■□□□ 1.49
NECTIN4Q96NY8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.39■■□□□ 1.49
NECTIN4Q96NY8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NECTIN4Q96NY8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NECTIN4Q96NY8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NECTIN4Q96NY8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
NECTIN4Q96NY8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.38■■□□□ 1.49
NECTIN4Q96NY8 AP001330.3-201ENST00000520123 633 ntBASIC24.38■■□□□ 1.49
NECTIN4Q96NY8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.38■■□□□ 1.49
NECTIN4Q96NY8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NECTIN4Q96NY8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.38■■□□□ 1.49
NECTIN4Q96NY8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NECTIN4Q96NY8 AC097381.1-201ENST00000429019 1296 ntBASIC24.37■■□□□ 1.49
NECTIN4Q96NY8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
NECTIN4Q96NY8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
NECTIN4Q96NY8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NECTIN4Q96NY8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NECTIN4Q96NY8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
NECTIN4Q96NY8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
NECTIN4Q96NY8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.36■■□□□ 1.49
NECTIN4Q96NY8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
NECTIN4Q96NY8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NECTIN4Q96NY8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
NECTIN4Q96NY8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.35■■□□□ 1.49
NECTIN4Q96NY8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.35■■□□□ 1.49
NECTIN4Q96NY8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NECTIN4Q96NY8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NECTIN4Q96NY8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NECTIN4Q96NY8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.35■■□□□ 1.49
NECTIN4Q96NY8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
NECTIN4Q96NY8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.35■■□□□ 1.49
NECTIN4Q96NY8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NECTIN4Q96NY8 SYT6-210ENST00000641643 1587 ntBASIC24.34■■□□□ 1.49
NECTIN4Q96NY8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
NECTIN4Q96NY8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NECTIN4Q96NY8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.34■■□□□ 1.49
NECTIN4Q96NY8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.34■■□□□ 1.49
NECTIN4Q96NY8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.34■■□□□ 1.49
NECTIN4Q96NY8 AC005703.6-201ENST00000623265 1329 ntBASIC24.34■■□□□ 1.49
NECTIN4Q96NY8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.33■■□□□ 1.49
NECTIN4Q96NY8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NECTIN4Q96NY8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.33■■□□□ 1.49
NECTIN4Q96NY8 AC139426.1-201ENST00000568218 2529 ntBASIC24.33■■□□□ 1.49
NECTIN4Q96NY8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
NECTIN4Q96NY8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.32■■□□□ 1.48
NECTIN4Q96NY8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.32■■□□□ 1.48
NECTIN4Q96NY8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.32■■□□□ 1.48
NECTIN4Q96NY8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NECTIN4Q96NY8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.32■■□□□ 1.48
NECTIN4Q96NY8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NECTIN4Q96NY8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
NECTIN4Q96NY8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NECTIN4Q96NY8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.31■■□□□ 1.48
NECTIN4Q96NY8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.31■■□□□ 1.48
NECTIN4Q96NY8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NECTIN4Q96NY8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NECTIN4Q96NY8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NECTIN4Q96NY8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.3■■□□□ 1.48
NECTIN4Q96NY8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NECTIN4Q96NY8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.3■■□□□ 1.48
NECTIN4Q96NY8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NECTIN4Q96NY8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NECTIN4Q96NY8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms