Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
KCNS1Q96KK3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNS1Q96KK3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
KCNS1Q96KK3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
KCNS1Q96KK3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.64■□□□□ 0.42
KCNS1Q96KK3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNS1Q96KK3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNS1Q96KK3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNS1Q96KK3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNS1Q96KK3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNS1Q96KK3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNS1Q96KK3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNS1Q96KK3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNS1Q96KK3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNS1Q96KK3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNS1Q96KK3 LINC00565-201ENST00000562710 2331 ntBASIC17.64■□□□□ 0.41
KCNS1Q96KK3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.64■□□□□ 0.41
KCNS1Q96KK3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.63■□□□□ 0.41
KCNS1Q96KK3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
KCNS1Q96KK3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNS1Q96KK3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNS1Q96KK3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNS1Q96KK3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNS1Q96KK3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNS1Q96KK3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNS1Q96KK3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNS1Q96KK3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
KCNS1Q96KK3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNS1Q96KK3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
KCNS1Q96KK3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.62■□□□□ 0.41
KCNS1Q96KK3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNS1Q96KK3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNS1Q96KK3 AP003733.4-201ENST00000623785 1697 ntBASIC17.62■□□□□ 0.41
KCNS1Q96KK3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
KCNS1Q96KK3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KCNS1Q96KK3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KCNS1Q96KK3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.62■□□□□ 0.41
KCNS1Q96KK3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNS1Q96KK3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.62■□□□□ 0.41
KCNS1Q96KK3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNS1Q96KK3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNS1Q96KK3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
KCNS1Q96KK3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNS1Q96KK3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNS1Q96KK3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNS1Q96KK3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNS1Q96KK3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 C9orf163-202ENST00000624034 2573 ntBASIC17.6■□□□□ 0.41
KCNS1Q96KK3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNS1Q96KK3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNS1Q96KK3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KCNS1Q96KK3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNS1Q96KK3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNS1Q96KK3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KCNS1Q96KK3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNS1Q96KK3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNS1Q96KK3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNS1Q96KK3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KCNS1Q96KK3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNS1Q96KK3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNS1Q96KK3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNS1Q96KK3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.59■□□□□ 0.41
KCNS1Q96KK3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNS1Q96KK3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNS1Q96KK3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNS1Q96KK3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNS1Q96KK3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.58■□□□□ 0.41
KCNS1Q96KK3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNS1Q96KK3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNS1Q96KK3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNS1Q96KK3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNS1Q96KK3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNS1Q96KK3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.58■□□□□ 0.4
KCNS1Q96KK3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
KCNS1Q96KK3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.58■□□□□ 0.4
KCNS1Q96KK3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNS1Q96KK3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNS1Q96KK3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.57■□□□□ 0.4
KCNS1Q96KK3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.57■□□□□ 0.4
KCNS1Q96KK3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.57■□□□□ 0.4
KCNS1Q96KK3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNS1Q96KK3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNS1Q96KK3 CR559946.2-201ENST00000623684 991 ntBASIC17.57■□□□□ 0.4
KCNS1Q96KK3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KCNS1Q96KK3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KCNS1Q96KK3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms