Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PTCD3Q96EY7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PTCD3Q96EY7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PTCD3Q96EY7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PTCD3Q96EY7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PTCD3Q96EY7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PTCD3Q96EY7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.13■■□□□ 1.29
PTCD3Q96EY7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD3Q96EY7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD3Q96EY7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PTCD3Q96EY7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
PTCD3Q96EY7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD3Q96EY7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD3Q96EY7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD3Q96EY7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.13■■□□□ 1.29
PTCD3Q96EY7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
PTCD3Q96EY7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCD3Q96EY7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCD3Q96EY7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
PTCD3Q96EY7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PTCD3Q96EY7 AC026202.3-201ENST00000600805 1127 ntBASIC23.12■■□□□ 1.29
PTCD3Q96EY7 RAP2CP1-202ENST00000605179 643 ntBASIC23.12■■□□□ 1.29
PTCD3Q96EY7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCD3Q96EY7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCD3Q96EY7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PTCD3Q96EY7 SLC6A10P-202ENST00000431994 2058 ntBASIC23.12■■□□□ 1.29
PTCD3Q96EY7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCD3Q96EY7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PTCD3Q96EY7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PTCD3Q96EY7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PTCD3Q96EY7 HSD17B1P1-201ENST00000590052 955 ntBASIC23.11■■□□□ 1.29
PTCD3Q96EY7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.11■■□□□ 1.29
PTCD3Q96EY7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PTCD3Q96EY7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PTCD3Q96EY7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PTCD3Q96EY7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PTCD3Q96EY7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PTCD3Q96EY7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PTCD3Q96EY7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD3Q96EY7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD3Q96EY7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD3Q96EY7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD3Q96EY7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.09■■□□□ 1.29
PTCD3Q96EY7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD3Q96EY7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD3Q96EY7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD3Q96EY7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD3Q96EY7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PTCD3Q96EY7 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.08■■□□□ 1.29
PTCD3Q96EY7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PTCD3Q96EY7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCD3Q96EY7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCD3Q96EY7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCD3Q96EY7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
PTCD3Q96EY7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCD3Q96EY7 RARRES2P2-201ENST00000394842 485 ntBASIC23.07■■□□□ 1.28
PTCD3Q96EY7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PTCD3Q96EY7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCD3Q96EY7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCD3Q96EY7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCD3Q96EY7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.07■■□□□ 1.28
PTCD3Q96EY7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PTCD3Q96EY7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD3Q96EY7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.06■■□□□ 1.28
PTCD3Q96EY7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD3Q96EY7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.06■■□□□ 1.28
PTCD3Q96EY7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.06■■□□□ 1.28
PTCD3Q96EY7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD3Q96EY7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD3Q96EY7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD3Q96EY7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD3Q96EY7 AC009831.1-201ENST00000580420 1582 ntBASIC23.06■■□□□ 1.28
PTCD3Q96EY7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.05■■□□□ 1.28
PTCD3Q96EY7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PTCD3Q96EY7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PTCD3Q96EY7 AC133552.2-201ENST00000619106 1032 ntBASIC23.05■■□□□ 1.28
PTCD3Q96EY7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.05■■□□□ 1.28
PTCD3Q96EY7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.05■■□□□ 1.28
PTCD3Q96EY7 AC004812.2-201ENST00000611079 2094 ntBASIC23.05■■□□□ 1.28
PTCD3Q96EY7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PTCD3Q96EY7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PTCD3Q96EY7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.04■■□□□ 1.28
PTCD3Q96EY7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PTCD3Q96EY7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCD3Q96EY7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
PTCD3Q96EY7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCD3Q96EY7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCD3Q96EY7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
PTCD3Q96EY7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCD3Q96EY7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCD3Q96EY7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.03■■□□□ 1.28
PTCD3Q96EY7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCD3Q96EY7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PTCD3Q96EY7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PTCD3Q96EY7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.02■■□□□ 1.28
PTCD3Q96EY7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCD3Q96EY7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PTCD3Q96EY7 C9orf163-202ENST00000624034 2573 ntBASIC23.02■■□□□ 1.28
PTCD3Q96EY7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCD3Q96EY7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms