Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.21■□□□□ 0.83
FOXRED1Q96CU9 AL157400.5-201ENST00000507624 621 ntBASIC20.21■□□□□ 0.83
FOXRED1Q96CU9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXRED1Q96CU9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXRED1Q96CU9 SMPD5-203ENST00000639008 1464 ntBASIC20.21■□□□□ 0.83
FOXRED1Q96CU9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXRED1Q96CU9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXRED1Q96CU9 AC004812.2-201ENST00000611079 2094 ntBASIC20.21■□□□□ 0.83
FOXRED1Q96CU9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXRED1Q96CU9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
FOXRED1Q96CU9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXRED1Q96CU9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXRED1Q96CU9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXRED1Q96CU9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXRED1Q96CU9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXRED1Q96CU9 GPX1-201ENST00000419349 1106 ntBASIC20.2■□□□□ 0.82
FOXRED1Q96CU9 AC022413.1-201ENST00000624602 984 ntBASIC20.2■□□□□ 0.82
FOXRED1Q96CU9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
FOXRED1Q96CU9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXRED1Q96CU9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXRED1Q96CU9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXRED1Q96CU9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
FOXRED1Q96CU9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
FOXRED1Q96CU9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXRED1Q96CU9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXRED1Q96CU9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
FOXRED1Q96CU9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXRED1Q96CU9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXRED1Q96CU9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXRED1Q96CU9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXRED1Q96CU9 AC068473.5-201ENST00000616428 2072 ntBASIC20.18■□□□□ 0.82
FOXRED1Q96CU9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXRED1Q96CU9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXRED1Q96CU9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXRED1Q96CU9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
FOXRED1Q96CU9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXRED1Q96CU9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
FOXRED1Q96CU9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXRED1Q96CU9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXRED1Q96CU9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXRED1Q96CU9 AC060814.1-201ENST00000554326 538 ntBASIC20.17■□□□□ 0.82
FOXRED1Q96CU9 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXRED1Q96CU9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXRED1Q96CU9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXRED1Q96CU9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXRED1Q96CU9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXRED1Q96CU9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXRED1Q96CU9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXRED1Q96CU9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXRED1Q96CU9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
FOXRED1Q96CU9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXRED1Q96CU9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
FOXRED1Q96CU9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
FOXRED1Q96CU9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
FOXRED1Q96CU9 KRT18P10-201ENST00000388836 1287 ntBASIC20.15■□□□□ 0.82
FOXRED1Q96CU9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXRED1Q96CU9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
FOXRED1Q96CU9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXRED1Q96CU9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
FOXRED1Q96CU9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXRED1Q96CU9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXRED1Q96CU9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.14■□□□□ 0.81
FOXRED1Q96CU9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXRED1Q96CU9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXRED1Q96CU9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXRED1Q96CU9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXRED1Q96CU9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXRED1Q96CU9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXRED1Q96CU9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXRED1Q96CU9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.13■□□□□ 0.81
FOXRED1Q96CU9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
FOXRED1Q96CU9 RNF126P1-201ENST00000567452 1320 ntBASIC20.13■□□□□ 0.81
FOXRED1Q96CU9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.13■□□□□ 0.81
FOXRED1Q96CU9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXRED1Q96CU9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.12■□□□□ 0.81
FOXRED1Q96CU9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
FOXRED1Q96CU9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FOXRED1Q96CU9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXRED1Q96CU9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
FOXRED1Q96CU9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXRED1Q96CU9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.12■□□□□ 0.81
FOXRED1Q96CU9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
FOXRED1Q96CU9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.12■□□□□ 0.81
FOXRED1Q96CU9 HLA-L-211ENST00000482052 1765 ntBASIC20.12■□□□□ 0.81
FOXRED1Q96CU9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXRED1Q96CU9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXRED1Q96CU9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXRED1Q96CU9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
FOXRED1Q96CU9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXRED1Q96CU9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.11■□□□□ 0.81
FOXRED1Q96CU9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FOXRED1Q96CU9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.11■□□□□ 0.81
FOXRED1Q96CU9 ABCB10P4-201ENST00000566803 2184 ntBASIC20.11■□□□□ 0.81
FOXRED1Q96CU9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.1■□□□□ 0.81
FOXRED1Q96CU9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.1■□□□□ 0.81
FOXRED1Q96CU9 RP9P-202ENST00000450133 1212 ntBASIC20.1■□□□□ 0.81
FOXRED1Q96CU9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.1■□□□□ 0.81
FOXRED1Q96CU9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXRED1Q96CU9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
FOXRED1Q96CU9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms