Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM54Q969K7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM54Q969K7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM54Q969K7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TMEM54Q969K7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM54Q969K7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM54Q969K7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM54Q969K7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM54Q969K7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM54Q969K7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM54Q969K7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.64■□□□□ 0.9
TMEM54Q969K7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM54Q969K7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM54Q969K7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.64■□□□□ 0.89
TMEM54Q969K7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TMEM54Q969K7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM54Q969K7 AC011551.1-201ENST00000614101 683 ntBASIC20.64■□□□□ 0.89
TMEM54Q969K7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM54Q969K7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM54Q969K7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM54Q969K7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TMEM54Q969K7 HLA-L-211ENST00000482052 1765 ntBASIC20.64■□□□□ 0.89
TMEM54Q969K7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.64■□□□□ 0.89
TMEM54Q969K7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEM54Q969K7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM54Q969K7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM54Q969K7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM54Q969K7 AC135731.1-201ENST00000569415 2548 ntBASIC20.63■□□□□ 0.89
TMEM54Q969K7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM54Q969K7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM54Q969K7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM54Q969K7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM54Q969K7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM54Q969K7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM54Q969K7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
TMEM54Q969K7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM54Q969K7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.62■□□□□ 0.89
TMEM54Q969K7 LINC01124-201ENST00000409786 2117 ntBASIC20.62■□□□□ 0.89
TMEM54Q969K7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
TMEM54Q969K7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM54Q969K7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM54Q969K7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TMEM54Q969K7 MIR4508-201ENST00000584178 70 ntBASIC20.61■□□□□ 0.89
TMEM54Q969K7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM54Q969K7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
TMEM54Q969K7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM54Q969K7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM54Q969K7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM54Q969K7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM54Q969K7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM54Q969K7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TMEM54Q969K7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM54Q969K7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM54Q969K7 LINC00543-201ENST00000567234 1845 ntBASIC20.6■□□□□ 0.89
TMEM54Q969K7 AC141586.4-201ENST00000624558 1573 ntBASIC20.59■□□□□ 0.89
TMEM54Q969K7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEM54Q969K7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM54Q969K7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM54Q969K7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TMEM54Q969K7 AC103834.1-201ENST00000520383 144 ntBASIC20.59■□□□□ 0.89
TMEM54Q969K7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM54Q969K7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM54Q969K7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM54Q969K7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM54Q969K7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TMEM54Q969K7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
TMEM54Q969K7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM54Q969K7 KRT18P24-201ENST00000344739 1156 ntBASIC20.58■□□□□ 0.89
TMEM54Q969K7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM54Q969K7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.58■□□□□ 0.89
TMEM54Q969K7 AC120024.1-201ENST00000562672 995 ntBASIC20.58■□□□□ 0.89
TMEM54Q969K7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM54Q969K7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM54Q969K7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.58■□□□□ 0.88
TMEM54Q969K7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM54Q969K7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM54Q969K7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM54Q969K7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM54Q969K7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM54Q969K7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM54Q969K7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM54Q969K7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM54Q969K7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.57■□□□□ 0.88
TMEM54Q969K7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM54Q969K7 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM54Q969K7 AC093323.1-202ENST00000635031 2045 ntBASIC20.57■□□□□ 0.88
TMEM54Q969K7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM54Q969K7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TMEM54Q969K7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM54Q969K7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM54Q969K7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM54Q969K7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM54Q969K7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM54Q969K7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM54Q969K7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM54Q969K7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM54Q969K7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM54Q969K7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM54Q969K7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
TMEM54Q969K7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms