Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.96■■■□□ 2.55
RAPGEF4Q8WZA2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
RAPGEF4Q8WZA2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
RAPGEF4Q8WZA2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
RAPGEF4Q8WZA2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
RAPGEF4Q8WZA2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC30.95■■■□□ 2.55
RAPGEF4Q8WZA2 PBX2P1-201ENST00000493219 1291 ntBASIC30.95■■■□□ 2.55
RAPGEF4Q8WZA2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.95■■■□□ 2.55
RAPGEF4Q8WZA2 AC106739.1-201ENST00000617035 715 ntBASIC30.95■■■□□ 2.55
RAPGEF4Q8WZA2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
RAPGEF4Q8WZA2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.94■■■□□ 2.54
RAPGEF4Q8WZA2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RAPGEF4Q8WZA2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC30.94■■■□□ 2.54
RAPGEF4Q8WZA2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.93■■■□□ 2.54
RAPGEF4Q8WZA2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC30.93■■■□□ 2.54
RAPGEF4Q8WZA2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RAPGEF4Q8WZA2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RAPGEF4Q8WZA2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.93■■■□□ 2.54
RAPGEF4Q8WZA2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.93■■■□□ 2.54
RAPGEF4Q8WZA2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.92■■■□□ 2.54
RAPGEF4Q8WZA2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RAPGEF4Q8WZA2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RAPGEF4Q8WZA2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
RAPGEF4Q8WZA2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
RAPGEF4Q8WZA2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC30.91■■■□□ 2.54
RAPGEF4Q8WZA2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
RAPGEF4Q8WZA2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
RAPGEF4Q8WZA2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RAPGEF4Q8WZA2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
RAPGEF4Q8WZA2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
RAPGEF4Q8WZA2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RAPGEF4Q8WZA2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.89■■■□□ 2.54
RAPGEF4Q8WZA2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.54
RAPGEF4Q8WZA2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
RAPGEF4Q8WZA2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC30.89■■■□□ 2.54
RAPGEF4Q8WZA2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RAPGEF4Q8WZA2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.89■■■□□ 2.53
RAPGEF4Q8WZA2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.88■■■□□ 2.53
RAPGEF4Q8WZA2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.88■■■□□ 2.53
RAPGEF4Q8WZA2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RAPGEF4Q8WZA2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
RAPGEF4Q8WZA2 UNC93B3-201ENST00000308076 687 ntBASIC30.88■■■□□ 2.53
RAPGEF4Q8WZA2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC30.88■■■□□ 2.53
RAPGEF4Q8WZA2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC30.88■■■□□ 2.53
RAPGEF4Q8WZA2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.88■■■□□ 2.53
RAPGEF4Q8WZA2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
RAPGEF4Q8WZA2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
RAPGEF4Q8WZA2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
RAPGEF4Q8WZA2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30.87■■■□□ 2.53
RAPGEF4Q8WZA2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
RAPGEF4Q8WZA2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
RAPGEF4Q8WZA2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.87■■■□□ 2.53
RAPGEF4Q8WZA2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
RAPGEF4Q8WZA2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RAPGEF4Q8WZA2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RAPGEF4Q8WZA2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RAPGEF4Q8WZA2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
RAPGEF4Q8WZA2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.85■■■□□ 2.53
RAPGEF4Q8WZA2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.85■■■□□ 2.53
RAPGEF4Q8WZA2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
RAPGEF4Q8WZA2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
RAPGEF4Q8WZA2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC30.85■■■□□ 2.53
RAPGEF4Q8WZA2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.85■■■□□ 2.53
RAPGEF4Q8WZA2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
RAPGEF4Q8WZA2 AC142381.2-201ENST00000566120 298 ntBASIC30.85■■■□□ 2.53
RAPGEF4Q8WZA2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
RAPGEF4Q8WZA2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC30.84■■■□□ 2.53
RAPGEF4Q8WZA2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RAPGEF4Q8WZA2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RAPGEF4Q8WZA2 SRD5A1P1-201ENST00000442297 786 ntBASIC30.84■■■□□ 2.53
RAPGEF4Q8WZA2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC30.84■■■□□ 2.53
RAPGEF4Q8WZA2 AL136162.1-201ENST00000607711 1078 ntBASIC30.84■■■□□ 2.53
RAPGEF4Q8WZA2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RAPGEF4Q8WZA2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
RAPGEF4Q8WZA2 AC010501.1-201ENST00000606270 1962 ntBASIC30.83■■■□□ 2.53
RAPGEF4Q8WZA2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RAPGEF4Q8WZA2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.83■■■□□ 2.53
RAPGEF4Q8WZA2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RAPGEF4Q8WZA2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
RAPGEF4Q8WZA2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RAPGEF4Q8WZA2 ZNRF2P3-201ENST00000424200 374 ntBASIC30.82■■■□□ 2.52
RAPGEF4Q8WZA2 AC004448.1-201ENST00000458332 883 ntBASIC30.82■■■□□ 2.52
RAPGEF4Q8WZA2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
RAPGEF4Q8WZA2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.82■■■□□ 2.52
RAPGEF4Q8WZA2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.82■■■□□ 2.52
RAPGEF4Q8WZA2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC30.82■■■□□ 2.52
RAPGEF4Q8WZA2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC30.82■■■□□ 2.52
RAPGEF4Q8WZA2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.81■■■□□ 2.52
RAPGEF4Q8WZA2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC30.8■■■□□ 2.52
RAPGEF4Q8WZA2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
RAPGEF4Q8WZA2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
RAPGEF4Q8WZA2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RAPGEF4Q8WZA2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.79■■■□□ 2.52
RAPGEF4Q8WZA2 AC135279.3-201ENST00000610945 1311 ntBASIC30.79■■■□□ 2.52
RAPGEF4Q8WZA2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
RAPGEF4Q8WZA2 AL031432.3-201ENST00000607698 485 ntBASIC30.79■■■□□ 2.52
RAPGEF4Q8WZA2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RAPGEF4Q8WZA2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
RAPGEF4Q8WZA2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
RAPGEF4Q8WZA2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms