Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AC025884.2-201ENST00000553429 711 ntBASIC20.4■□□□□ 0.86
RAB40AQ8WXH6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.4■□□□□ 0.86
RAB40AQ8WXH6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RAB40AQ8WXH6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAB40AQ8WXH6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.4■□□□□ 0.86
RAB40AQ8WXH6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB40AQ8WXH6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB40AQ8WXH6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.39■□□□□ 0.86
RAB40AQ8WXH6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB40AQ8WXH6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RAB40AQ8WXH6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
RAB40AQ8WXH6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB40AQ8WXH6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40AQ8WXH6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40AQ8WXH6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40AQ8WXH6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40AQ8WXH6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB40AQ8WXH6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40AQ8WXH6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RAB40AQ8WXH6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB40AQ8WXH6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
RAB40AQ8WXH6 AL359504.2-201ENST00000605506 1601 ntBASIC20.38■□□□□ 0.85
RAB40AQ8WXH6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
RAB40AQ8WXH6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB40AQ8WXH6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB40AQ8WXH6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.37■□□□□ 0.85
RAB40AQ8WXH6 AC012354.3-201ENST00000623734 483 ntBASIC20.37■□□□□ 0.85
RAB40AQ8WXH6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB40AQ8WXH6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB40AQ8WXH6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.37■□□□□ 0.85
RAB40AQ8WXH6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.36■□□□□ 0.85
RAB40AQ8WXH6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.36■□□□□ 0.85
RAB40AQ8WXH6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB40AQ8WXH6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB40AQ8WXH6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB40AQ8WXH6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RAB40AQ8WXH6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.35■□□□□ 0.85
RAB40AQ8WXH6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40AQ8WXH6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40AQ8WXH6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40AQ8WXH6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.35■□□□□ 0.85
RAB40AQ8WXH6 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.35■□□□□ 0.85
RAB40AQ8WXH6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40AQ8WXH6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.35■□□□□ 0.85
RAB40AQ8WXH6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40AQ8WXH6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40AQ8WXH6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40AQ8WXH6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40AQ8WXH6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB40AQ8WXH6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RAB40AQ8WXH6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.34■□□□□ 0.85
RAB40AQ8WXH6 RP9P-202ENST00000450133 1212 ntBASIC20.34■□□□□ 0.85
RAB40AQ8WXH6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB40AQ8WXH6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB40AQ8WXH6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB40AQ8WXH6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RAB40AQ8WXH6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.34■□□□□ 0.85
RAB40AQ8WXH6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RAB40AQ8WXH6 MIR3960-201ENST00000583311 91 ntBASIC20.33■□□□□ 0.85
RAB40AQ8WXH6 AC133552.2-201ENST00000619106 1032 ntBASIC20.33■□□□□ 0.85
RAB40AQ8WXH6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAB40AQ8WXH6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAB40AQ8WXH6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAB40AQ8WXH6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
RAB40AQ8WXH6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RAB40AQ8WXH6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.33■□□□□ 0.84
RAB40AQ8WXH6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RAB40AQ8WXH6 AC004812.2-201ENST00000611079 2094 ntBASIC20.32■□□□□ 0.84
RAB40AQ8WXH6 KRT18P60-201ENST00000312876 1297 ntBASIC20.32■□□□□ 0.84
RAB40AQ8WXH6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RAB40AQ8WXH6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40AQ8WXH6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40AQ8WXH6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40AQ8WXH6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40AQ8WXH6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.31■□□□□ 0.84
RAB40AQ8WXH6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.31■□□□□ 0.84
RAB40AQ8WXH6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40AQ8WXH6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.31■□□□□ 0.84
RAB40AQ8WXH6 AC009831.1-201ENST00000580420 1582 ntBASIC20.31■□□□□ 0.84
RAB40AQ8WXH6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40AQ8WXH6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RAB40AQ8WXH6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40AQ8WXH6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40AQ8WXH6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40AQ8WXH6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RAB40AQ8WXH6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40AQ8WXH6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB40AQ8WXH6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB40AQ8WXH6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40AQ8WXH6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RAB40AQ8WXH6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40AQ8WXH6 AC093536.1-201ENST00000569153 554 ntBASIC20.3■□□□□ 0.84
RAB40AQ8WXH6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.3■□□□□ 0.84
RAB40AQ8WXH6 AC026202.3-201ENST00000600805 1127 ntBASIC20.3■□□□□ 0.84
RAB40AQ8WXH6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40AQ8WXH6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40AQ8WXH6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40AQ8WXH6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40AQ8WXH6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40AQ8WXH6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms