Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
SH3RF2Q8TEC5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SH3RF2Q8TEC5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SH3RF2Q8TEC5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.32■■□□□ 1.48
SH3RF2Q8TEC5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.32■■□□□ 1.48
SH3RF2Q8TEC5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SH3RF2Q8TEC5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH3RF2Q8TEC5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH3RF2Q8TEC5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.31■■□□□ 1.48
SH3RF2Q8TEC5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.31■■□□□ 1.48
SH3RF2Q8TEC5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.31■■□□□ 1.48
SH3RF2Q8TEC5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.31■■□□□ 1.48
SH3RF2Q8TEC5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH3RF2Q8TEC5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 MIR6724-1-201ENST00000616420 92 ntBASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 MIR6724-2-201ENST00000616483 92 ntBASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 MIR6724-4-201ENST00000617390 92 ntBASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 MIR6724-3-201ENST00000622482 92 ntBASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH3RF2Q8TEC5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF2Q8TEC5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF2Q8TEC5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SH3RF2Q8TEC5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF2Q8TEC5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.29■■□□□ 1.48
SH3RF2Q8TEC5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF2Q8TEC5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SH3RF2Q8TEC5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
SH3RF2Q8TEC5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF2Q8TEC5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF2Q8TEC5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF2Q8TEC5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF2Q8TEC5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
SH3RF2Q8TEC5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.28■■□□□ 1.48
SH3RF2Q8TEC5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.28■■□□□ 1.48
SH3RF2Q8TEC5 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.28■■□□□ 1.48
SH3RF2Q8TEC5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.28■■□□□ 1.48
SH3RF2Q8TEC5 AL117332.1-201ENST00000622628 974 ntBASIC24.28■■□□□ 1.48
SH3RF2Q8TEC5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
SH3RF2Q8TEC5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.28■■□□□ 1.48
SH3RF2Q8TEC5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.28■■□□□ 1.48
SH3RF2Q8TEC5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.27■■□□□ 1.48
SH3RF2Q8TEC5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.27■■□□□ 1.48
SH3RF2Q8TEC5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SH3RF2Q8TEC5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.26■■□□□ 1.47
SH3RF2Q8TEC5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SH3RF2Q8TEC5 AC019069.1-201ENST00000610008 1333 ntBASIC24.26■■□□□ 1.47
SH3RF2Q8TEC5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
SH3RF2Q8TEC5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH3RF2Q8TEC5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH3RF2Q8TEC5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.25■■□□□ 1.47
SH3RF2Q8TEC5 AC131281.2-201ENST00000520478 145 ntBASIC24.25■■□□□ 1.47
SH3RF2Q8TEC5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH3RF2Q8TEC5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH3RF2Q8TEC5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH3RF2Q8TEC5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH3RF2Q8TEC5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH3RF2Q8TEC5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH3RF2Q8TEC5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.24■■□□□ 1.47
SH3RF2Q8TEC5 MIR3621-201ENST00000580529 85 ntBASIC24.24■■□□□ 1.47
SH3RF2Q8TEC5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH3RF2Q8TEC5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH3RF2Q8TEC5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH3RF2Q8TEC5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SH3RF2Q8TEC5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
SH3RF2Q8TEC5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SH3RF2Q8TEC5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.23■■□□□ 1.47
SH3RF2Q8TEC5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.23■■□□□ 1.47
SH3RF2Q8TEC5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
SH3RF2Q8TEC5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SH3RF2Q8TEC5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SH3RF2Q8TEC5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SH3RF2Q8TEC5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SH3RF2Q8TEC5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SH3RF2Q8TEC5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.22■■□□□ 1.47
SH3RF2Q8TEC5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SH3RF2Q8TEC5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
SH3RF2Q8TEC5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SH3RF2Q8TEC5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.21■■□□□ 1.47
SH3RF2Q8TEC5 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.21■■□□□ 1.47
SH3RF2Q8TEC5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.21■■□□□ 1.47
SH3RF2Q8TEC5 AL356740.2-201ENST00000601559 647 ntBASIC24.21■■□□□ 1.47
SH3RF2Q8TEC5 AC145676.1-201ENST00000514988 2004 ntBASIC24.21■■□□□ 1.47
SH3RF2Q8TEC5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SH3RF2Q8TEC5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.21■■□□□ 1.47
SH3RF2Q8TEC5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.2■■□□□ 1.46
SH3RF2Q8TEC5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.2■■□□□ 1.46
SH3RF2Q8TEC5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms